REE1 (YJL217W)


Gene profile

Gene name: REE1
Reference locus (S288C): YJL217W
Gene biotype: protein_coding

Description: Cytoplasmic protein involved in the regulation of enolase (ENO1); mRNA expression is induced by calcium shortage, copper deficiency (via Mac1p) and the presence of galactose (via Gal4p); mRNA expression is also regulated by the cell cycle

Top 10 interactors (score): YJL218W (0.983); IRC7 (0.853); CTT1 (0.85); CTR3 (0.78); BDS1 (0.779); YPL245W (0.77); YJL028W (0.749); MAC1 (0.749); YJL022W (0.749); FMP33 (0.749); YJL027C (0.749); HIT1 (0.747); YJR056C (0.747); VTH2 (0.731); CRS5 (0.7); YBL036C (0.699); FRE7 (0.698); FRE1 (0.696); YEL075W-A (0.692); YLR157W-E (0.692)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:23344-23940:+ gene-YJL217W_Bruggeman rna-NM_001181650.1_Bruggeman cds-NP_012318.1_Bruggeman 98.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:25370-25966:+ gene-YJL217W_CAT1 rna-NM_001181650.1_CAT1 cds-NP_012318.1_CAT1 98.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia MBVS01000086.1:7203-7799:- gene-YJL217W_CBS1585 rna-NM_001181650.1_CBS1585 cds-NP_012318.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:5600-6196:+ gene-YJL217W_CENPK1137D rna-NM_001181650.1_CENPK1137D cds-NP_012318.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia MBWB01000056.1:615-1211:+ gene-YJL217W_EthanolRed rna-NM_001181650.1_EthanolRed cds-NP_012318.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia MBWD01000053.1:775-1371:+ gene-YJL217W_FaliES1 rna-NM_001181650.1_FaliES1 cds-NP_012318.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:25077-25673:+ gene-YJL217W_MUCL30387 rna-NM_001181650.1_MUCL30387 cds-NP_012318.1_MUCL30387 98.4 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:21233-21829:+ gene-YJL217W_MUCL30388 rna-NM_001181650.1_MUCL30388 cds-NP_012318.1_MUCL30388 98.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia MBVN01000044.1:7219-7815:- gene-YJL217W_MUCL39482 rna-NM_001181650.1_MUCL39482 cds-NP_012318.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:20524-21120:+ gene-YJL217W_MUCL42920 rna-NM_001181650.1_MUCL42920 cds-NP_012318.1_MUCL42920 98.4 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:23112-23708:+ gene-YJL217W_NCIM3186 rna-NM_001181650.1_NCIM3186 cds-NP_012318.1_NCIM3186 98.3 100.0 Verified 1 1 0 False False False True False
NCYC1407 GCA_001738225.1 Sake Asia MBVM01000020.1:7164-7760:- gene-YJL217W_NCYC1407 rna-NM_001181650.1_NCYC1407 cds-NP_012318.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:23133-23729:+ gene-YJL217W_S288C rna-NM_001181650.1_S288C cds-NP_012318.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000065.1:723-1319:- gene-YJL217W_ThermosaccDry rna-NM_001181650.1_ThermosaccDry cds-NP_012318.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:1895-2490:+ gene-YJL217W_ZTW1 rna-NM_001181650.1_ZTW1 cds-NP_012318.1_ZTW1 98.3 99.8 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:16197-16793:+ gene-YJL217W_Sparadoxus rna-NM_001181650.1_Sparadoxus cds-NP_012318.1_Sparadoxus 88.1 100.0 Verified 1 1 1 False True False False False

Additional files