Gene name: REC8
Reference locus (S288C): YPR007C
Gene biotype: protein_coding
Description: Meiotic recombination protein REC8; Meiosis-specific component of the sister chromatid cohesion complex; alpha-kleisin family member that maintains cohesion between sister chromatids during meiosis I; maintains cohesion between centromeres of sister chromatids until meiosis II; independent of its role in sister chromatid cohesion, Rec8p promotes allelic collisions and prevents nonspecific chromosome interactions; homolog of S. pombe Rec8p
Top 10 interactors (score): CDC5 (0.983); SMC3 (0.963); ESP1 (0.95); SPO11 (0.942); SMC1 (0.903); IRR1 (0.902); HOP1 (0.9); RED1 (0.89); MCD1 (0.878); ZIP1 (0.864); DMC1 (0.854); NDT80 (0.818); MEK1 (0.814); MND2 (0.8); PDS5 (0.778); MND1 (0.776); SGO1 (0.76); PDS1 (0.751); MSH4 (0.745); SPO13 (0.715)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:540935-542977:- | gene-YPR007C_AKU4011 | rna-NM_001184104.1_AKU4011 | cds-NP_015332.1_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:354185-356227:+ | gene-YPR007C_BG1 | rna-NM_001184104.1_BG1 | cds-NP_015332.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:617973-620015:- | gene-YPR007C_Bruggeman | rna-NM_001184104.1_Bruggeman | cds-NP_015332.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:661055-663097:- | gene-YPR007C_CAT1 | rna-NM_001184104.1_CAT1 | cds-NP_015332.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:544622-546664:- | gene-YPR007C_CBS1585 | rna-NM_001184104.1_CBS1585 | cds-NP_015332.1_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:559059-561101:- | gene-YPR007C_CBS436 | rna-NM_001184104.1_CBS436 | cds-NP_015332.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:548371-550413:- | gene-YPR007C_CBS6412 | rna-NM_001184104.1_CBS6412 | cds-NP_015332.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:541082-543124:- | gene-YPR007C_CBS6413 | rna-NM_001184104.1_CBS6413 | cds-NP_015332.1_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:569311-571353:- | gene-YPR007C_CENPK1137D | rna-NM_001184104.1_CENPK1137D | cds-NP_015332.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:538869-540911:- | gene-YPR007C_EthanolRed | rna-NM_001184104.1_EthanolRed | cds-NP_015332.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:546699-548741:- | gene-YPR007C_FaliES1 | rna-NM_001184104.1_FaliES1 | cds-NP_015332.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000337.1:8554-10596:- | gene-YPR007C_JAY291 | rna-NM_001184104.1_JAY291 | cds-NP_015332.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:559184-561226:- | gene-YPR007C_MUCL30387 | rna-NM_001184104.1_MUCL30387 | cds-NP_015332.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:558285-560327:- | gene-YPR007C_MUCL30388 | rna-NM_001184104.1_MUCL30388 | cds-NP_015332.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:537862-539904:- | gene-YPR007C_MUCL39482 | rna-NM_001184104.1_MUCL39482 | cds-NP_015332.1_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:598067-600109:- | gene-YPR007C_MUCL42920 | rna-NM_001184104.1_MUCL42920 | cds-NP_015332.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:569319-571361:- | gene-YPR007C_NCIM3186 | rna-NM_001184104.1_NCIM3186 | cds-NP_015332.1_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:545561-547603:- | gene-YPR007C_NCYC1407 | rna-NM_001184104.1_NCYC1407 | cds-NP_015332.1_NCYC1407 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:552514-554556:- | gene-YPR007C_PE2H3 | rna-NM_001184104.1_PE2H3 | cds-NP_015332.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:552129-554171:- | gene-YPR007C_PE2H4 | rna-NM_001184104.1_PE2H4 | cds-NP_015332.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:569336-571378:- | gene-YPR007C_S288C | rna-NM_001184104.1_S288C | cds-NP_015332.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:128912-130954:+ | gene-YPR007C_SA1 | rna-NM_001184104.1_SA1 | cds-NP_015332.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:546498-548540:- | gene-YPR007C_ThermosaccDry | rna-NM_001184104.1_ThermosaccDry | cds-NP_015332.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:562768-564810:- | gene-YPR007C_VR1 | rna-NM_001184104.1_VR1 | cds-NP_015332.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:545803-547845:- | gene-YPR007C_ZTW1 | rna-NM_001184104.1_ZTW1 | cds-NP_015332.1_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:545385-547430:- | gene-YPR007C_Sparadoxus | rna-NM_001184104.1_Sparadoxus | cds-NP_015332.1_Sparadoxus | 88.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |