REC114 (YMR133W)


Gene profile

Gene name: REC114
Reference locus (S288C): YMR133W
Gene biotype: protein_coding

Description: Protein involved in early stages of meiotic recombination; possibly involved in the coordination of recombination and meiotic division; mutations lead to premature initiation of the first meiotic division; Belongs to the REC114 family

Top 10 interactors (score): REC107 (0.975); MEI4 (0.975); REC102 (0.967); REC104 (0.962); SPO11 (0.893); SKI8 (0.86); SPO13 (0.786); RED1 (0.766); HOP1 (0.757); MER1 (0.751); NAM8 (0.712); REC8 (0.71); PCH2 (0.673); MEK1 (0.651); HOP2 (0.617); DMC1 (0.592); MND1 (0.571); SPO1 (0.57); YKR005C (0.565); YOL131W (0.556)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:575707-577109:+ gene-YMR133W_AKU4011 rna-NM_001182634.1_AKU4011 cds-NP_013852.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000068.1:95425-96827:- gene-YMR133W_BG1 rna-NM_001182634.1_BG1 cds-NP_013852.1_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:518887-520289:+ gene-YMR133W_Bruggeman rna-NM_001182634.1_Bruggeman cds-NP_013852.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:521101-522503:+ gene-YMR133W_CAT1 rna-NM_001182634.1_CAT1 cds-NP_013852.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:508630-510032:+ gene-YMR133W_CBS1585 rna-NM_001182634.1_CBS1585 cds-NP_013852.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:512503-513905:+ gene-YMR133W_CBS436 rna-NM_001182634.1_CBS436 cds-NP_013852.1_CBS436 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:621623-623025:+ gene-YMR133W_CBS6412 rna-NM_001182634.1_CBS6412 cds-NP_013852.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:507190-508592:+ gene-YMR133W_CBS6413 rna-NM_001182634.1_CBS6413 cds-NP_013852.1_CBS6413 99.3 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:530722-532124:+ gene-YMR133W_CENPK1137D rna-NM_001182634.1_CENPK1137D cds-NP_013852.1_CENPK1137D 99.3 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:506820-508222:+ gene-YMR133W_EthanolRed rna-NM_001182634.1_EthanolRed cds-NP_013852.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:512761-514163:+ gene-YMR133W_FaliES1 rna-NM_001182634.1_FaliES1 cds-NP_013852.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000294.1:12828-14230:- gene-YMR133W_JAY291 rna-NM_001182634.1_JAY291 cds-NP_013852.1_JAY291 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:513612-515014:+ gene-YMR133W_MUCL30387 rna-NM_001182634.1_MUCL30387 cds-NP_013852.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:519140-520542:+ gene-YMR133W_MUCL30388 rna-NM_001182634.1_MUCL30388 cds-NP_013852.1_MUCL30388 99.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:509331-510733:+ gene-YMR133W_MUCL39482 rna-NM_001182634.1_MUCL39482 cds-NP_013852.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:515625-517027:+ gene-YMR133W_MUCL42920 rna-NM_001182634.1_MUCL42920 cds-NP_013852.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:536161-537563:+ gene-YMR133W_NCIM3186 rna-NM_001182634.1_NCIM3186 cds-NP_013852.1_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:508969-510371:+ gene-YMR133W_NCYC1407 rna-NM_001182634.1_NCYC1407 cds-NP_013852.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:519404-520806:+ gene-YMR133W_PE2H3 rna-NM_001182634.1_PE2H3 cds-NP_013852.1_PE2H3 99.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:519859-521261:+ gene-YMR133W_PE2H4 rna-NM_001182634.1_PE2H4 cds-NP_013852.1_PE2H4 99.6 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:536207-537609:+ gene-YMR133W_S288C rna-NM_001182634.1_S288C cds-NP_013852.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000048.1:33666-35068:- gene-YMR133W_SA1 rna-NM_001182634.1_SA1 cds-NP_013852.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:509218-510620:+ gene-YMR133W_ThermosaccDry rna-NM_001182634.1_ThermosaccDry cds-NP_013852.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:521906-523308:+ gene-YMR133W_VR1 rna-NM_001182634.1_VR1 cds-NP_013852.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:484363-485765:+ gene-YMR133W_ZTW1 rna-NM_001182634.1_ZTW1 cds-NP_013852.1_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:520713-522124:+ gene-YMR133W_Sparadoxus rna-NM_001182634.1_Sparadoxus cds-NP_013852.1_Sparadoxus 82.0 99.6 Verified 1 1 1 False True False False False

Additional files