Gene name: REC107
Reference locus (S288C): YJR021C
Gene biotype: protein_coding
Description: Recombination protein 107; Protein involved in early stages of meiotic recombination; involved in coordination between the initiation of recombination and the first division of meiosis; part of a complex (Rec107p-Mei4p-Rec114p) required for ds break formation
Top 10 interactors (score): MEI4 (0.981); REC114 (0.975); MER1 (0.956); REC102 (0.937); REC104 (0.935); SPP1 (0.932); NAM8 (0.922); AMA1 (0.892); SKI8 (0.886); HFM1 (0.882); SPO13 (0.817); SPO11 (0.811); SPO22 (0.746); PCH2 (0.712); IST3 (0.695); RED1 (0.692); SAE3 (0.671); HOP1 (0.654); BUD13 (0.596); MUD2 (0.573)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:451708-452735:- | gene-YJR021C_AKU4011 | rna-NM_001181679.1_AKU4011 | cds-NP_012555.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:159992-161016:+ | gene-YJR021C_BG1 | rna-NM_001181679.1_BG1 | cds-NP_012555.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:465797-466821:- | gene-YJR021C_Bruggeman | rna-NM_001181679.1_Bruggeman | cds-NP_012555.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:469750-470774:- | gene-YJR021C_CAT1 | rna-NM_001181679.1_CAT1 | cds-NP_012555.1_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:463297-464324:- | gene-YJR021C_CBS1585 | rna-NM_001181679.1_CBS1585 | cds-NP_012555.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:482267-483291:- | gene-YJR021C_CBS436 | rna-NM_001181679.1_CBS436 | cds-NP_012555.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:451527-452554:- | gene-YJR021C_CBS6412 | rna-NM_001181679.1_CBS6412 | cds-NP_012555.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:453750-454777:- | gene-YJR021C_CBS6413 | rna-NM_001181679.1_CBS6413 | cds-NP_012555.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:451039-452063:- | gene-YJR021C_CENPK1137D | rna-NM_001181679.1_CENPK1137D | cds-NP_012555.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:456691-457715:- | gene-YJR021C_EthanolRed | rna-NM_001181679.1_EthanolRed | cds-NP_012555.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:467908-468932:- | gene-YJR021C_FaliES1 | rna-NM_001181679.1_FaliES1 | cds-NP_012555.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000384.1:14154-15178:- | gene-YJR021C_JAY291 | rna-NM_001181679.1_JAY291 | cds-NP_012555.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:466080-467104:- | gene-YJR021C_MUCL30387 | rna-NM_001181679.1_MUCL30387 | cds-NP_012555.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:462649-463673:- | gene-YJR021C_MUCL30388 | rna-NM_001181679.1_MUCL30388 | cds-NP_012555.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:456751-457778:- | gene-YJR021C_MUCL39482 | rna-NM_001181679.1_MUCL39482 | cds-NP_012555.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:462060-463084:- | gene-YJR021C_MUCL42920 | rna-NM_001181679.1_MUCL42920 | cds-NP_012555.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:468534-469558:- | gene-YJR021C_NCIM3186 | rna-NM_001181679.1_NCIM3186 | cds-NP_012555.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:454608-455635:- | gene-YJR021C_NCYC1407 | rna-NM_001181679.1_NCYC1407 | cds-NP_012555.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:472931-473955:- | gene-YJR021C_PE2H3 | rna-NM_001181679.1_PE2H3 | cds-NP_012555.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:466627-467651:- | gene-YJR021C_PE2H4 | rna-NM_001181679.1_PE2H4 | cds-NP_012555.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:468555-469579:- | gene-YJR021C_S288C | rna-NM_001181679.1_S288C | cds-NP_012555.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:264557-265581:- | gene-YJR021C_SA1 | rna-NM_001181679.1_SA1 | cds-NP_012555.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:461557-462581:- | gene-YJR021C_ThermosaccDry | rna-NM_001181679.1_ThermosaccDry | cds-NP_012555.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:463840-464864:- | gene-YJR021C_VR1 | rna-NM_001181679.1_VR1 | cds-NP_012555.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:441485-442509:- | gene-YJR021C_ZTW1 | rna-NM_001181679.1_ZTW1 | cds-NP_012555.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:466296-467317:- | gene-YJR021C_Sparadoxus | rna-NM_001181679.1_Sparadoxus | cds-NP_012555.1_Sparadoxus | 89.8 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |