Gene name: REC102
Reference locus (S288C): YLR329W
Gene biotype: protein_coding
Description: Protein involved in early stages of meiotic recombination; required for chromosome synapsis; forms a complex with Rec104p and Spo11p necessary during the initiation of recombination; Belongs to the TOP6B-like family
Top 10 interactors (score): REC104 (0.997); SPO11 (0.978); SKI8 (0.969); REC114 (0.967); MEI4 (0.939); REC107 (0.937); SPO13 (0.78); RED1 (0.759); MER1 (0.748); HOP1 (0.712); YLR334C (0.678); SLZ1 (0.671); NAM8 (0.574); HOP2 (0.572); MND1 (0.571); SPO1 (0.571); DMC1 (0.57); MEK1 (0.565); RAD52 (0.534); BSC4 (0.526)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:735388-736279:+ | gene-YLR329W_AKU4011 | rna-NM_001182218.1_AKU4011 | cds-NP_013433.2_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:2637-3528:+ | gene-YLR329W_BG1 | rna-NM_001182218.1_BG1 | cds-NP_013433.2_BG1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:770981-771872:+ | gene-YLR329W_Bruggeman | rna-NM_001182218.1_Bruggeman | cds-NP_013433.2_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:769378-770269:+ | gene-YLR329W_CAT1 | rna-NM_001182218.1_CAT1 | cds-NP_013433.2_CAT1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:770305-771196:+ | gene-YLR329W_CBS1585 | rna-NM_001182218.1_CBS1585 | cds-NP_013433.2_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:754414-755305:+ | gene-YLR329W_CBS436 | rna-NM_001182218.1_CBS436 | cds-NP_013433.2_CBS436 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:807716-808607:+ | gene-YLR329W_CBS6412 | rna-NM_001182218.1_CBS6412 | cds-NP_013433.2_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:770976-771867:+ | gene-YLR329W_CBS6413 | rna-NM_001182218.1_CBS6413 | cds-NP_013433.2_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:771057-771948:+ | gene-YLR329W_CENPK1137D | rna-NM_001182218.1_CENPK1137D | cds-NP_013433.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:728185-729076:+ | gene-YLR329W_EthanolRed | rna-NM_001182218.1_EthanolRed | cds-NP_013433.2_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:757386-758277:+ | gene-YLR329W_FaliES1 | rna-NM_001182218.1_FaliES1 | cds-NP_013433.2_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000296.1:9586-10477:- | gene-YLR329W_JAY291 | rna-NM_001182218.1_JAY291 | cds-NP_013433.2_JAY291 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:769960-770851:+ | gene-YLR329W_MUCL30387 | rna-NM_001182218.1_MUCL30387 | cds-NP_013433.2_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:775543-776434:+ | gene-YLR329W_MUCL30388 | rna-NM_001182218.1_MUCL30388 | cds-NP_013433.2_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:771545-772436:+ | gene-YLR329W_MUCL39482 | rna-NM_001182218.1_MUCL39482 | cds-NP_013433.2_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:766707-767598:+ | gene-YLR329W_MUCL42920 | rna-NM_001182218.1_MUCL42920 | cds-NP_013433.2_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:786416-787307:+ | gene-YLR329W_NCIM3186 | rna-NM_001182218.1_NCIM3186 | cds-NP_013433.2_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:780886-781777:+ | gene-YLR329W_NCYC1407 | rna-NM_001182218.1_NCYC1407 | cds-NP_013433.2_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:768177-769068:+ | gene-YLR329W_PE2H3 | rna-NM_001182218.1_PE2H3 | cds-NP_013433.2_PE2H3 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:767921-768812:+ | gene-YLR329W_PE2H4 | rna-NM_001182218.1_PE2H4 | cds-NP_013433.2_PE2H4 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:786442-787333:+ | gene-YLR329W_S288C | rna-NM_001182218.1_S288C | cds-NP_013433.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:261530-262421:- | gene-YLR329W_SA1 | rna-NM_001182218.1_SA1 | cds-NP_013433.2_SA1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:759277-760168:+ | gene-YLR329W_ThermosaccDry | rna-NM_001182218.1_ThermosaccDry | cds-NP_013433.2_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:771394-772285:+ | gene-YLR329W_VR1 | rna-NM_001182218.1_VR1 | cds-NP_013433.2_VR1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:97689-98580:+ | gene-YLR329W_ZTW1 | rna-NM_001182218.1_ZTW1 | cds-NP_013433.2_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:745774-746665:+ | gene-YLR329W_Sparadoxus | rna-NM_001182218.1_Sparadoxus | cds-NP_013433.2_Sparadoxus | 87.6 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |