RDS1 (YCR106W)


Gene profile

Gene name: RDS1
Reference locus (S288C): YCR106W
Gene biotype: protein_coding

Description: Regulator of drug sensitivity 1; Putative zinc cluster transcription factor; involved in conferring resistance to cycloheximide

Top 10 interactors (score): YMR320W (0.744); YOR381W-A (0.721); HAP2 (0.711); YOR385W (0.71); UBX3 (0.654); YDR132C (0.617); YGL242C (0.617); YDL109C (0.615); YCR101C (0.612); MPO1 (0.612); DSD1 (0.575); POF1 (0.574); YLR108C (0.572); VPS55 (0.571); OCA5 (0.567); OCA1 (0.564); AAD3 (0.563); PAU3 (0.555); YOR387C (0.551); TDA5 (0.55)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
BG1 GCA_001932575.1 Bioethanol South America MSHP01000114.1:31-2530:- gene-YCR106W_BG1 rna-NM_001178813.1_BG1 cds-NP_010031.1_BG1 99.7 100.0 Unannotated 1 1 0 False False False True False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:304233-306731:+ gene-YCR106W_Bruggeman rna-NM_001178813.1_Bruggeman cds-NP_010031.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:314577-317075:+ gene-YCR106W_CAT1 rna-NM_001178813.1_CAT1 cds-NP_010031.1_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005345.1:313510-316008:+ gene-YCR106W_CBS436 rna-NM_001178813.1_CBS436 cds-NP_010031.1_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:425-2541:- gene-YCR106W_CENPK1137D rna-NM_001178813.1_CENPK1137D cds-NP_010031.1_CENPK1137D 52.2 72.4 Unannotated 1 1 0 False False False True False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:16978-19473:- gene-YCR106W_EthanolRed rna-NM_001178813.1_EthanolRed cds-NP_010031.1_EthanolRed 95.9 99.8 Unannotated 1 1 0 False False False False True
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:16927-19422:- gene-YCR106W_FaliES1 rna-NM_001178813.1_FaliES1 cds-NP_010031.1_FaliES1 95.9 99.8 Unannotated 1 1 0 False False False False True
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:300788-303286:+ gene-YCR106W_MUCL30387 rna-NM_001178813.1_MUCL30387 cds-NP_010031.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:299288-301786:+ gene-YCR106W_MUCL30388 rna-NM_001178813.1_MUCL30388 cds-NP_010031.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:680272-682771:+ gene-YCR106W_PE2H3 rna-NM_001178813.1_PE2H3 cds-NP_010031.1_PE2H3 99.7 100.0 Unannotated 1 1 0 False False False True False
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:316834-319332:+ gene-YCR106W_PE2H4 rna-NM_001178813.1_PE2H4 cds-NP_010031.1_PE2H4 99.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:310958-313456:+ gene-YCR106W_S288C rna-NM_001178813.1_S288C cds-NP_010031.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000132.1:1016-3515:- gene-YCR106W_SA1 rna-NM_001178813.1_SA1 cds-NP_010031.1_SA1 99.7 100.0 Unannotated 1 1 0 False False False True False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:16916-19411:- gene-YCR106W_ThermosaccDry rna-NM_001178813.1_ThermosaccDry cds-NP_010031.1_ThermosaccDry 95.9 99.8 Unannotated 1 1 0 False False False False True
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:323722-326220:+ gene-YCR106W_VR1 rna-NM_001178813.1_VR1 cds-NP_010031.1_VR1 99.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000005.1:5291-7786:- gene-YCR106W_ZTW1 rna-NM_001178813.1_ZTW1 cds-NP_010031.1_ZTW1 95.9 99.8 Unannotated 1 1 0 False False False False True
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:28681-31176:- gene-YCR106W_Sparadoxus rna-NM_001178813.1_Sparadoxus cds-NP_010031.1_Sparadoxus 85.9 99.6 Verified 1 1 1 False True False False False

Additional files