RDN25-2 (YNCL0021C)

Gene profile

Gene name: RDN25-2
Reference locus (S288C): YNCL0021C
Gene biotype: rRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:435304-438149:- gene-YNCL0021C_AKU4011 rna-NR_132218.1_AKU4011 Unknown 83.8 83.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000096.1:1-2692:- gene-YNCL0021C_BG1 rna-NR_132218.1_BG1 Unknown 79.2 79.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:446354-449687:- gene-YNCL0021C_Bruggeman rna-NR_132218.1_Bruggeman Unknown 98.1 98.1 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:454536-455018:- gene-YNCL0021C_CAT1 rna-NR_132218.1_CAT1 Unknown 14.2 14.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:441903-444807:- gene-YNCL0021C_CBS1585 rna-NR_132218.1_CBS1585 Unknown 85.5 85.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005354.1:432195-435040:- gene-YNCL0021C_CBS436 rna-NR_132218.1_CBS436 Unknown 83.8 83.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:447926-448716:- gene-YNCL0021C_CBS6412 rna-NR_132218.1_CBS6412 Unknown 23.2 23.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:450830-451618:- gene-YNCL0021C_CBS6413 rna-NR_132218.1_CBS6413 Unknown 23.2 23.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable JH711456.1:1-1844:+ gene-YNCL0021C_CENPK1137D rna-NR_132218.1_CENPK1137D Unknown 54.2 54.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:434812-437657:- gene-YNCL0021C_EthanolRed rna-NR_132218.1_EthanolRed Unknown 83.8 83.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:433976-437319:- gene-YNCL0021C_FaliES1 rna-NR_132218.1_FaliES1 Unknown 98.4 98.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000137.1:4489-5975:+ gene-YNCL0021C_JAY291 rna-NR_132218.1_JAY291 Unknown 43.7 43.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:446301-449641:- gene-YNCL0021C_MUCL30387 rna-NR_132218.1_MUCL30387 Unknown 98.3 98.3 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:460329-461117:- gene-YNCL0021C_MUCL30388 rna-NR_132218.1_MUCL30388 Unknown 23.2 23.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:442596-445910:- gene-YNCL0021C_MUCL39482 rna-NR_132218.1_MUCL39482 Unknown 97.6 97.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:442306-445639:- gene-YNCL0021C_MUCL42920 rna-NR_132218.1_MUCL42920 Unknown 98.1 98.1 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:451760-455155:- gene-YNCL0021C_NCIM3186 rna-NR_132218.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:435364-438209:- gene-YNCL0021C_NCYC1407 rna-NR_132218.1_NCYC1407 Unknown 83.8 83.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:448867-452262:- gene-YNCL0021C_PE2H3 rna-NR_132218.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:448608-452003:- gene-YNCL0021C_PE2H4 rna-NR_132218.1_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:460923-464318:- gene-YNCL0021C_S288C rna-NR_132218.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000115.1:1-1239:- gene-YNCL0021C_SA1 rna-NR_132218.1_SA1 Unknown 36.4 36.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:435690-439032:- gene-YNCL0021C_ThermosaccDry rna-NR_132218.1_ThermosaccDry Unknown 98.4 98.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:448133-451335:- gene-YNCL0021C_VR1 rna-NR_132218.1_VR1 Unknown 94.3 94.3 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files