RDN25-1 (YNCL0012C)


Gene profile

Gene name: RDN25-1
Reference locus (S288C): YNCL0012C
Gene biotype: rRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:443897-444685:- gene-YNCL0012C_AKU4011 rna-NR_132209.1_AKU4011 Unknown 23.2 23.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000177.1:1093-1881:- gene-YNCL0012C_BG1 rna-NR_132209.1_BG1 Unknown 23.2 23.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:450524-451253:- gene-YNCL0012C_CBS1585 rna-NR_132209.1_CBS1585 Unknown 21.4 21.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005354.1:440671-441459:- gene-YNCL0012C_CBS436 rna-NR_132209.1_CBS436 Unknown 23.2 23.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable JH711469.1:1-640:+ gene-YNCL0012C_CENPK1137D rna-NR_132209.1_CENPK1137D Unknown 18.8 18.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:443379-444169:- gene-YNCL0012C_EthanolRed rna-NR_132209.1_EthanolRed Unknown 23.2 23.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000372.1:1-806:+ gene-YNCL0012C_JAY291 rna-NR_132209.1_JAY291 Unknown 23.7 23.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:460897-464292:- gene-YNCL0012C_NCIM3186 rna-NR_132209.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:443945-444733:- gene-YNCL0012C_NCYC1407 rna-NR_132209.1_NCYC1407 Unknown 23.2 23.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:439746-443141:- gene-YNCL0012C_PE2H3 rna-NR_132209.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:439487-442882:- gene-YNCL0012C_PE2H4 rna-NR_132209.1_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:451786-455181:- gene-YNCL0012C_S288C rna-NR_132209.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000133.1:1-1550:- gene-YNCL0012C_SA1 rna-NR_132209.1_SA1 Unknown 45.6 45.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files