Gene name: RDI1
Reference locus (S288C): YDL135C
Gene biotype: protein_coding
Description: Rho GDP dissociation inhibitor; involved in the localization and regulation of Cdc42p and Rho1p; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): RHO1 (0.999); CDC42 (0.999); RHO4 (0.985); RHO3 (0.979); RHO2 (0.947); BEM1 (0.931); RHO5 (0.927); CDC24 (0.896); BEM3 (0.881); CLA4 (0.862); BNI1 (0.862); SAC7 (0.847); RSR1 (0.841); GEM1 (0.829); ACT1 (0.829); BEM2 (0.823); RGA1 (0.812); LEM3 (0.781); GDI1 (0.729); GIC2 (0.712)
Homologues (species, bitscore): ARHGDIA (Homo sapiens, 133.3); Arhgdia (Mus musculus, 134.4); arhgdia (Danio rerio, 125.6); arhgdig (Xenopus tropicalis, 126.3); RhoGDI (Drosophila melanogaster, 122.1); rhi-1 (Caenorhabditis elegans, 104.0); SCN1 (Arabidopsis thaliana, 105.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:203323-203931:- | gene-YDL135C_AKU4011 | rna-NM_001180195.1_AKU4011 | cds-NP_010146.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:346039-346647:+ | gene-YDL135C_BG1 | rna-NM_001180195.1_BG1 | cds-NP_010146.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:219992-220600:- | gene-YDL135C_Bruggeman | rna-NM_001180195.1_Bruggeman | cds-NP_010146.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:123587-124195:- | gene-YDL135C_CAT1 | rna-NM_001180195.1_CAT1 | cds-NP_010146.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:201586-202194:- | gene-YDL135C_CBS1585 | rna-NM_001180195.1_CBS1585 | cds-NP_010146.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:218253-218861:- | gene-YDL135C_CBS436 | rna-NM_001180195.1_CBS436 | cds-NP_010146.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:200390-200998:- | gene-YDL135C_CBS6412 | rna-NM_001180195.1_CBS6412 | cds-NP_010146.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:219748-220356:- | gene-YDL135C_CBS6413 | rna-NM_001180195.1_CBS6413 | cds-NP_010146.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:217330-217938:- | gene-YDL135C_CENPK1137D | rna-NM_001180195.1_CENPK1137D | cds-NP_010146.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:214354-214962:- | gene-YDL135C_EthanolRed | rna-NM_001180195.1_EthanolRed | cds-NP_010146.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:220075-220683:- | gene-YDL135C_FaliES1 | rna-NM_001180195.1_FaliES1 | cds-NP_010146.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000204.1:8420-9028:+ | gene-YDL135C_JAY291 | rna-NM_001180195.1_JAY291 | cds-NP_010146.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:218440-219048:- | gene-YDL135C_MUCL30387 | rna-NM_001180195.1_MUCL30387 | cds-NP_010146.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:209308-209916:- | gene-YDL135C_MUCL30388 | rna-NM_001180195.1_MUCL30388 | cds-NP_010146.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:202440-203048:- | gene-YDL135C_MUCL39482 | rna-NM_001180195.1_MUCL39482 | cds-NP_010146.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000146.1:8569-9177:+ | gene-YDL135C_MUCL42920 | rna-NM_001180195.1_MUCL42920 | cds-NP_010146.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:218603-219211:- | gene-YDL135C_NCIM3186 | rna-NM_001180195.1_NCIM3186 | cds-NP_010146.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:202721-203329:- | gene-YDL135C_NCYC1407 | rna-NM_001180195.1_NCYC1407 | cds-NP_010146.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:209484-210092:- | gene-YDL135C_PE2H3 | rna-NM_001180195.1_PE2H3 | cds-NP_010146.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:209488-210096:- | gene-YDL135C_PE2H4 | rna-NM_001180195.1_PE2H4 | cds-NP_010146.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:218680-219288:- | gene-YDL135C_S288C | rna-NM_001180195.1_S288C | cds-NP_010146.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000043.1:84248-84856:- | gene-YDL135C_SA1 | rna-NM_001180195.1_SA1 | cds-NP_010146.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:219836-220444:- | gene-YDL135C_ThermosaccDry | rna-NM_001180195.1_ThermosaccDry | cds-NP_010146.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:221458-222066:- | gene-YDL135C_VR1 | rna-NM_001180195.1_VR1 | cds-NP_010146.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:217764-218372:- | gene-YDL135C_ZTW1 | rna-NM_001180195.1_ZTW1 | cds-NP_010146.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:219853-220461:- | gene-YDL135C_Sparadoxus | rna-NM_001180195.1_Sparadoxus | cds-NP_010146.1_Sparadoxus | 93.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |