RCN2 (YOR220W)


Gene profile

Gene name: RCN2
Reference locus (S288C): YOR220W
Gene biotype: protein_coding

Description: Regulator of calcineurin 2; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; phosphorylated in response to alpha factor; protein abundance increases in response to DNA replication stress

Top 10 interactors (score): CMK2 (0.973); CIN1 (0.856); RCN1 (0.843); GYP7 (0.798); YHR138C (0.78); AIM17 (0.763); HSP42 (0.756); PUN1 (0.741); PMC1 (0.739); PEP12 (0.733); MNC1 (0.73); DIA1 (0.708); YHR140W (0.691); YPS1 (0.691); BMH1 (0.664); ORM2 (0.63); YBR284W (0.628); CRZ1 (0.616); CPR6 (0.61); RIE1 (0.609)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:746113-746910:+ gene-YOR220W_AKU4011 rna-NM_001183639.1_AKU4011 cds-NP_014863.1_AKU4011 99.7 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:148145-148942:+ gene-YOR220W_BG1 rna-NM_001183639.1_BG1 cds-NP_014863.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:731571-732368:+ gene-YOR220W_Bruggeman rna-NM_001183639.1_Bruggeman cds-NP_014863.1_Bruggeman 99.7 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:732222-733019:+ gene-YOR220W_CAT1 rna-NM_001183639.1_CAT1 cds-NP_014863.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:729100-729897:+ gene-YOR220W_CBS1585 rna-NM_001183639.1_CBS1585 cds-NP_014863.1_CBS1585 99.7 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:727787-728584:+ gene-YOR220W_CBS436 rna-NM_001183639.1_CBS436 cds-NP_014863.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:726219-727016:+ gene-YOR220W_CBS6412 rna-NM_001183639.1_CBS6412 cds-NP_014863.1_CBS6412 99.7 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:734858-735655:+ gene-YOR220W_CBS6413 rna-NM_001183639.1_CBS6413 cds-NP_014863.1_CBS6413 99.7 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:755094-755891:+ gene-YOR220W_CENPK1137D rna-NM_001183639.1_CENPK1137D cds-NP_014863.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:722251-723048:+ gene-YOR220W_EthanolRed rna-NM_001183639.1_EthanolRed cds-NP_014863.1_EthanolRed 99.7 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:727648-728445:+ gene-YOR220W_FaliES1 rna-NM_001183639.1_FaliES1 cds-NP_014863.1_FaliES1 99.7 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000381.1:98319-99116:- gene-YOR220W_JAY291 rna-NM_001183639.1_JAY291 cds-NP_014863.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:734910-735707:+ gene-YOR220W_MUCL30387 rna-NM_001183639.1_MUCL30387 cds-NP_014863.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:742328-743125:+ gene-YOR220W_MUCL30388 rna-NM_001183639.1_MUCL30388 cds-NP_014863.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:736429-737226:+ gene-YOR220W_MUCL39482 rna-NM_001183639.1_MUCL39482 cds-NP_014863.1_MUCL39482 99.7 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:746009-746806:+ gene-YOR220W_MUCL42920 rna-NM_001183639.1_MUCL42920 cds-NP_014863.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:755217-756014:+ gene-YOR220W_NCIM3186 rna-NM_001183639.1_NCIM3186 cds-NP_014863.1_NCIM3186 99.6 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:736531-737328:+ gene-YOR220W_NCYC1407 rna-NM_001183639.1_NCYC1407 cds-NP_014863.1_NCYC1407 99.7 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:735920-736717:+ gene-YOR220W_PE2H3 rna-NM_001183639.1_PE2H3 cds-NP_014863.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:746297-747094:+ gene-YOR220W_PE2H4 rna-NM_001183639.1_PE2H4 cds-NP_014863.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:755328-756125:+ gene-YOR220W_S288C rna-NM_001183639.1_S288C cds-NP_014863.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000006.1:165327-166124:+ gene-YOR220W_SA1 rna-NM_001183639.1_SA1 cds-NP_014863.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:726833-727630:+ gene-YOR220W_ThermosaccDry rna-NM_001183639.1_ThermosaccDry cds-NP_014863.1_ThermosaccDry 99.7 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:790361-791158:+ gene-YOR220W_VR1 rna-NM_001183639.1_VR1 cds-NP_014863.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:459735-460532:+ gene-YOR220W_ZTW1 rna-NM_001183639.1_ZTW1 cds-NP_014863.1_ZTW1 99.7 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:732714-733511:+ gene-YOR220W_Sparadoxus rna-NM_001183639.1_Sparadoxus cds-NP_014863.1_Sparadoxus 90.6 100.0 Verified 1 1 1 False True False False False

Additional files