Gene name: RCN1
Reference locus (S288C): YKL159C
Gene biotype: protein_coding
Description: Calcipressin-like protein; Protein involved in calcineurin regulation during calcium signaling; has similarity to H. sapiens DSCR1 which is found in the Down Syndrome candidate region
Top 10 interactors (score): CNA1 (0.997); CMP2 (0.996); CNB1 (0.958); CRZ1 (0.923); VCX1 (0.856); PMC1 (0.85); RCN2 (0.843); CBP1 (0.814); PMR1 (0.781); FRT1 (0.779); SLM1 (0.76); CMD1 (0.734); FRT2 (0.713); CDC4 (0.655); YCL012C (0.6); ENA1 (0.574); ECM7 (0.574); CCH1 (0.558); MCK1 (0.535); CMK2 (0.523)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:140709-141344:- | gene-YKL159C_AKU4011 | rna-NM_001179725.1_AKU4011 | cds-NP_012763.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:117281-117916:- | gene-YKL159C_BG1 | rna-NM_001179725.1_BG1 | cds-NP_012763.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:158365-159000:- | gene-YKL159C_Bruggeman | rna-NM_001179725.1_Bruggeman | cds-NP_012763.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:153182-153817:- | gene-YKL159C_CAT1 | rna-NM_001179725.1_CAT1 | cds-NP_012763.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:152932-153567:- | gene-YKL159C_CBS1585 | rna-NM_001179725.1_CBS1585 | cds-NP_012763.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:151524-152159:- | gene-YKL159C_CBS436 | rna-NM_001179725.1_CBS436 | cds-NP_012763.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:137957-138592:- | gene-YKL159C_CBS6412 | rna-NM_001179725.1_CBS6412 | cds-NP_012763.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:153403-154038:- | gene-YKL159C_CBS6413 | rna-NM_001179725.1_CBS6413 | cds-NP_012763.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:153463-154098:- | gene-YKL159C_CENPK1137D | rna-NM_001179725.1_CENPK1137D | cds-NP_012763.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:151455-152090:- | gene-YKL159C_EthanolRed | rna-NM_001179725.1_EthanolRed | cds-NP_012763.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:152267-152902:- | gene-YKL159C_FaliES1 | rna-NM_001179725.1_FaliES1 | cds-NP_012763.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000239.2:11232-11867:- | gene-YKL159C_JAY291 | rna-NM_001179725.1_JAY291 | cds-NP_012763.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:160462-161097:- | gene-YKL159C_MUCL30387 | rna-NM_001179725.1_MUCL30387 | cds-NP_012763.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:154817-155452:- | gene-YKL159C_MUCL30388 | rna-NM_001179725.1_MUCL30388 | cds-NP_012763.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:152742-153377:- | gene-YKL159C_MUCL39482 | rna-NM_001179725.1_MUCL39482 | cds-NP_012763.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:157148-157783:- | gene-YKL159C_MUCL42920 | rna-NM_001179725.1_MUCL42920 | cds-NP_012763.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:153805-154440:- | gene-YKL159C_NCIM3186 | rna-NM_001179725.1_NCIM3186 | cds-NP_012763.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:152934-153569:- | gene-YKL159C_NCYC1407 | rna-NM_001179725.1_NCYC1407 | cds-NP_012763.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:160008-160643:- | gene-YKL159C_PE2H3 | rna-NM_001179725.1_PE2H3 | cds-NP_012763.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:156302-156937:- | gene-YKL159C_PE2H4 | rna-NM_001179725.1_PE2H4 | cds-NP_012763.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:153816-154451:- | gene-YKL159C_S288C | rna-NM_001179725.1_S288C | cds-NP_012763.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:70233-70868:- | gene-YKL159C_SA1 | rna-NM_001179725.1_SA1 | cds-NP_012763.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:152967-153602:- | gene-YKL159C_ThermosaccDry | rna-NM_001179725.1_ThermosaccDry | cds-NP_012763.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:151802-152437:- | gene-YKL159C_VR1 | rna-NM_001179725.1_VR1 | cds-NP_012763.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:151487-152122:- | gene-YKL159C_ZTW1 | rna-NM_001179725.1_ZTW1 | cds-NP_012763.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:167643-168278:- | gene-YKL159C_Sparadoxus | rna-NM_001179725.1_Sparadoxus | cds-NP_012763.1_Sparadoxus | 87.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |