Gene name: RCK2
Reference locus (S288C): YLR248W
Gene biotype: protein_coding
Description: Serine/threonine-protein kinase RCK2; Protein kinase involved in response to oxidative and osmotic stress; identified as suppressor of S. pombe cell cycle checkpoint mutations; similar to CaM (calmodulin) kinases; RCK2 has a paralog, RCK1, that arose from the whole genome duplication
Top 10 interactors (score): HOG1 (0.983); SKO1 (0.867); STE50 (0.812); SMP1 (0.748); PBS2 (0.705); SIT4 (0.671); HOT1 (0.655); SEC4 (0.653); VPS41 (0.649); PTP2 (0.598); MTC1 (0.597); PTC2 (0.592); EFT1 (0.59); EFT2 (0.59); PTP1 (0.59); CDC42 (0.577); PTC1 (0.532); PTC3 (0.531); PTP3 (0.522); GPA2 (0.516)
Homologues (species, bitscore): CAMK1G (Homo sapiens, 178.7); Pnck (Mus musculus, 179.1); si:ch73-60h1.1 (Danio rerio, 189.5); pnck (Xenopus tropicalis, 187.2); CaMKI (Drosophila melanogaster, 172.9); cmk-1 (Caenorhabditis elegans, 172.2); SIP4 (Arabidopsis thaliana, 143.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:588465-590297:+ | gene-YLR248W_AKU4011 | rna-NM_001182135.1_AKU4011 | cds-NP_013349.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:141604-143436:- | gene-YLR248W_BG1 | rna-NM_001182135.1_BG1 | cds-NP_013349.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:622699-624531:+ | gene-YLR248W_Bruggeman | rna-NM_001182135.1_Bruggeman | cds-NP_013349.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:621826-623658:+ | gene-YLR248W_CAT1 | rna-NM_001182135.1_CAT1 | cds-NP_013349.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:623960-625792:+ | gene-YLR248W_CBS1585 | rna-NM_001182135.1_CBS1585 | cds-NP_013349.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:608163-609995:+ | gene-YLR248W_CBS436 | rna-NM_001182135.1_CBS436 | cds-NP_013349.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:586935-588767:+ | gene-YLR248W_CBS6412 | rna-NM_001182135.1_CBS6412 | cds-NP_013349.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:624255-626087:+ | gene-YLR248W_CBS6413 | rna-NM_001182135.1_CBS6413 | cds-NP_013349.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:618862-620694:+ | gene-YLR248W_CENPK1137D | rna-NM_001182135.1_CENPK1137D | cds-NP_013349.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:582576-584408:+ | gene-YLR248W_EthanolRed | rna-NM_001182135.1_EthanolRed | cds-NP_013349.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:611413-613245:+ | gene-YLR248W_FaliES1 | rna-NM_001182135.1_FaliES1 | cds-NP_013349.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000136.1:46127-47959:- | gene-YLR248W_JAY291 | rna-NM_001182135.1_JAY291 | cds-NP_013349.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:623554-625386:+ | gene-YLR248W_MUCL30387 | rna-NM_001182135.1_MUCL30387 | cds-NP_013349.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:627680-629512:+ | gene-YLR248W_MUCL30388 | rna-NM_001182135.1_MUCL30388 | cds-NP_013349.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:624941-626773:+ | gene-YLR248W_MUCL39482 | rna-NM_001182135.1_MUCL39482 | cds-NP_013349.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:619698-621530:+ | gene-YLR248W_MUCL42920 | rna-NM_001182135.1_MUCL42920 | cds-NP_013349.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:634226-636058:+ | gene-YLR248W_NCIM3186 | rna-NM_001182135.1_NCIM3186 | cds-NP_013349.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:611927-613759:+ | gene-YLR248W_NCYC1407 | rna-NM_001182135.1_NCYC1407 | cds-NP_013349.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:615651-617483:+ | gene-YLR248W_PE2H3 | rna-NM_001182135.1_PE2H3 | cds-NP_013349.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:615395-617227:+ | gene-YLR248W_PE2H4 | rna-NM_001182135.1_PE2H4 | cds-NP_013349.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:634252-636084:+ | gene-YLR248W_S288C | rna-NM_001182135.1_S288C | cds-NP_013349.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:46383-48215:- | gene-YLR248W_SA1 | rna-NM_001182135.1_SA1 | cds-NP_013349.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:613422-615254:+ | gene-YLR248W_ThermosaccDry | rna-NM_001182135.1_ThermosaccDry | cds-NP_013349.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:624768-626600:+ | gene-YLR248W_VR1 | rna-NM_001182135.1_VR1 | cds-NP_013349.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:137736-139568:+ | gene-YLR248W_ZTW1 | rna-NM_001182135.1_ZTW1 | cds-NP_013349.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:599546-601378:+ | gene-YLR248W_Sparadoxus | rna-NM_001182135.1_Sparadoxus | cds-NP_013349.1_Sparadoxus | 91.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |