Gene name: RCK1
Reference locus (S288C): YGL158W
Gene biotype: protein_coding
Description: Serine/threonine-protein kinase RCK1; Protein kinase involved in oxidative stress response; promotes pseudohyphal growth via activation of Ubp3p phosphorylation; identified as suppressor of S. pombe cell cycle checkpoint mutations; RCK1 has a paralog, RCK2, that arose from the whole genome duplication
Top 10 interactors (score): HOG1 (0.857); CAD1 (0.846); RLM1 (0.761); SEC4 (0.653); SKO1 (0.637); RBS1 (0.618); SMP1 (0.614); MSC6 (0.56); BRE5 (0.557); UBP3 (0.552); YDR090C (0.526); YKL222C (0.525); FUS3 (0.501); GPA1 (0.5); GPA2 (0.5); YFR016C (0.498); ELM1 (0.496); SAK1 (0.495); TOS3 (0.495); PBS2 (0.493)
Homologues (species, bitscore): CAMK1G (Homo sapiens, 203.8); Camk1g (Mus musculus, 204.5); LOC794026 (Danio rerio, 202.2); camk1 (Xenopus tropicalis, 203.8); CaMKI (Drosophila melanogaster, 189.1); cmk-1 (Caenorhabditis elegans, 198.4); CIPK9 (Arabidopsis thaliana, 154.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:209609-211147:+ | gene-YGL158W_AKU4011 | rna-NM_001181023.1_AKU4011 | cds-NP_011357.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:193808-195346:- | gene-YGL158W_BG1 | rna-NM_001181023.1_BG1 | cds-NP_011357.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:211754-213291:+ | gene-YGL158W_Bruggeman | rna-NM_001181023.1_Bruggeman | cds-NP_011357.1_Bruggeman | 99.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:207619-209157:+ | gene-YGL158W_CAT1 | rna-NM_001181023.1_CAT1 | cds-NP_011357.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:212992-214530:+ | gene-YGL158W_CBS1585 | rna-NM_001181023.1_CBS1585 | cds-NP_011357.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:207602-209140:+ | gene-YGL158W_CBS436 | rna-NM_001181023.1_CBS436 | cds-NP_011357.1_CBS436 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:199201-200739:+ | gene-YGL158W_CBS6412 | rna-NM_001181023.1_CBS6412 | cds-NP_011357.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:207545-209083:+ | gene-YGL158W_CBS6413 | rna-NM_001181023.1_CBS6413 | cds-NP_011357.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:207295-208833:+ | gene-YGL158W_CENPK1137D | rna-NM_001181023.1_CENPK1137D | cds-NP_011357.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:199753-201291:+ | gene-YGL158W_EthanolRed | rna-NM_001181023.1_EthanolRed | cds-NP_011357.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:200999-202537:+ | gene-YGL158W_FaliES1 | rna-NM_001181023.1_FaliES1 | cds-NP_011357.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000090.1:50822-52360:+ | gene-YGL158W_JAY291 | rna-NM_001181023.1_JAY291 | cds-NP_011357.1_JAY291 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:208979-210516:+ | gene-YGL158W_MUCL30387 | rna-NM_001181023.1_MUCL30387 | cds-NP_011357.1_MUCL30387 | 99.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:212094-213631:+ | gene-YGL158W_MUCL30388 | rna-NM_001181023.1_MUCL30388 | cds-NP_011357.1_MUCL30388 | 99.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:209772-211310:+ | gene-YGL158W_MUCL39482 | rna-NM_001181023.1_MUCL39482 | cds-NP_011357.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:212331-213868:+ | gene-YGL158W_MUCL42920 | rna-NM_001181023.1_MUCL42920 | cds-NP_011357.1_MUCL42920 | 99.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:207033-208571:+ | gene-YGL158W_NCIM3186 | rna-NM_001181023.1_NCIM3186 | cds-NP_011357.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:201236-202774:+ | gene-YGL158W_NCYC1407 | rna-NM_001181023.1_NCYC1407 | cds-NP_011357.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:203124-204662:+ | gene-YGL158W_PE2H3 | rna-NM_001181023.1_PE2H3 | cds-NP_011357.1_PE2H3 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:208119-209657:+ | gene-YGL158W_PE2H4 | rna-NM_001181023.1_PE2H4 | cds-NP_011357.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:207033-208571:+ | gene-YGL158W_S288C | rna-NM_001181023.1_S288C | cds-NP_011357.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000081.1:46197-47735:- | gene-YGL158W_SA1 | rna-NM_001181023.1_SA1 | cds-NP_011357.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:201228-202766:+ | gene-YGL158W_ThermosaccDry | rna-NM_001181023.1_ThermosaccDry | cds-NP_011357.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:208038-209576:+ | gene-YGL158W_VR1 | rna-NM_001181023.1_VR1 | cds-NP_011357.1_VR1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:199333-200871:+ | gene-YGL158W_ZTW1 | rna-NM_001181023.1_ZTW1 | cds-NP_011357.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:205404-206942:+ | gene-YGL158W_Sparadoxus | rna-NM_001181023.1_Sparadoxus | cds-NP_011357.1_Sparadoxus | 84.6 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |