Gene name: RCF3
Reference locus (S288C): YBR255C-A
Gene biotype: protein_coding
Description: Uncharacterized protein YBR255C-A; Putative protein of unknown function; may interact with respiratory chain complexes III (ubiquinol-cytochrome c reductase) or IV (cytochrome c oxidase); identified by sequence comparison with hemiascomycetous yeast species
Top 10 interactors (score): RCF1 (0.864); RCF2 (0.837); YIL077C (0.816); COR1 (0.782); YBL059W (0.757); YBR230W-A (0.749); YKL133C (0.748); GEP7 (0.747); AIM11 (0.746); MIC60 (0.722); FMP10 (0.711); MTC3 (0.695); COQ11 (0.694); MIC26 (0.692); MGR3 (0.691); MIC27 (0.691); MPM1 (0.671); MIC12 (0.67); MIC19 (0.65); MIC10 (0.614)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:710903-711357:- | gene-YBR255C-A_AKU4011 | rna-NM_001184510.3_AKU4011 | cds-NP_116328.4_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000066.1:81924-82380:- | gene-YBR255C-A_BG1 | rna-NM_001184510.3_BG1 | cds-NP_116328.4_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:712065-712521:- | gene-YBR255C-A_Bruggeman | rna-NM_001184510.3_Bruggeman | cds-NP_116328.4_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:715819-716275:- | gene-YBR255C-A_CAT1 | rna-NM_001184510.3_CAT1 | cds-NP_116328.4_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:702469-702923:- | gene-YBR255C-A_CBS1585 | rna-NM_001184510.3_CBS1585 | cds-NP_116328.4_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:708914-709370:- | gene-YBR255C-A_CBS436 | rna-NM_001184510.3_CBS436 | cds-NP_116328.4_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:797084-797538:- | gene-YBR255C-A_CBS6412 | rna-NM_001184510.3_CBS6412 | cds-NP_116328.4_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:708517-708971:- | gene-YBR255C-A_CBS6413 | rna-NM_001184510.3_CBS6413 | cds-NP_116328.4_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:720526-720982:- | gene-YBR255C-A_CENPK1137D | rna-NM_001184510.3_CENPK1137D | cds-NP_116328.4_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:833940-834394:- | gene-YBR255C-A_EthanolRed | rna-NM_001184510.3_EthanolRed | cds-NP_116328.4_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:727287-727741:- | gene-YBR255C-A_FaliES1 | rna-NM_001184510.3_FaliES1 | cds-NP_116328.4_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000067.1:76315-76769:+ | gene-YBR255C-A_JAY291 | rna-NM_001184510.3_JAY291 | cds-NP_116328.4_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:714108-714564:- | gene-YBR255C-A_MUCL30387 | rna-NM_001184510.3_MUCL30387 | cds-NP_116328.4_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:731191-731647:- | gene-YBR255C-A_MUCL30388 | rna-NM_001184510.3_MUCL30388 | cds-NP_116328.4_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:700776-701230:- | gene-YBR255C-A_MUCL39482 | rna-NM_001184510.3_MUCL39482 | cds-NP_116328.4_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:710646-711102:- | gene-YBR255C-A_MUCL42920 | rna-NM_001184510.3_MUCL42920 | cds-NP_116328.4_MUCL42920 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:726415-726871:- | gene-YBR255C-A_NCIM3186 | rna-NM_001184510.3_NCIM3186 | cds-NP_116328.4_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:702665-703119:- | gene-YBR255C-A_NCYC1407 | rna-NM_001184510.3_NCYC1407 | cds-NP_116328.4_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:725797-726251:- | gene-YBR255C-A_PE2H3 | rna-NM_001184510.3_PE2H3 | cds-NP_116328.4_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:723473-723927:- | gene-YBR255C-A_PE2H4 | rna-NM_001184510.3_PE2H4 | cds-NP_116328.4_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:726618-727074:- | gene-YBR255C-A_S288C | rna-NM_001184510.3_S288C | cds-NP_116328.4_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000019.1:81745-82201:- | gene-YBR255C-A_SA1 | rna-NM_001184510.3_SA1 | cds-NP_116328.4_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:726279-726733:- | gene-YBR255C-A_ThermosaccDry | rna-NM_001184510.3_ThermosaccDry | cds-NP_116328.4_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:706492-706948:- | gene-YBR255C-A_VR1 | rna-NM_001184510.3_VR1 | cds-NP_116328.4_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:699126-699580:- | gene-YBR255C-A_ZTW1 | rna-NM_001184510.3_ZTW1 | cds-NP_116328.4_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:743043-743496:- | gene-YBR255C-A_Sparadoxus | rna-NM_001184510.3_Sparadoxus | cds-NP_116328.4_Sparadoxus | 93.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |