Gene name: RBK1
Reference locus (S288C): YCR036W
Gene biotype: protein_coding
Description: Putative ribokinase; Belongs to the carbohydrate kinase PfkB family. Ribokinase subfamily
Top 10 interactors (score): RKI1 (0.979); TKL2 (0.97); PRM15 (0.969); TKL1 (0.969); HNT2 (0.963); NIT2 (0.962); GSH2 (0.962); PRX1 (0.962); YPL225W (0.962); SFB3 (0.962); PRS2 (0.953); PRS4 (0.953); PRS3 (0.953); PRS5 (0.95); PRS1 (0.95); PGM1 (0.931); PGM2 (0.922); DUG1 (0.9); DUR1,2 (0.864); NQM1 (0.845)
Homologues (species, bitscore): RBKS (Homo sapiens, 114.0); Rbks (Mus musculus, 112.1); rbks (Danio rerio, 105.5); rbks (Xenopus tropicalis, 75.1); CG13369 (Drosophila melanogaster, 99.4); F07A11.5 (Caenorhabditis elegans, 125.9); AT1G17160 (Arabidopsis thaliana, 134.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:186761-187762:+ | gene-YCR036W_AKU4011 | rna-NM_001178750.1_AKU4011 | cds-NP_009965.2_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:41256-42257:+ | gene-YCR036W_BG1 | rna-NM_001178750.1_BG1 | cds-NP_009965.2_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:183048-184049:+ | gene-YCR036W_Bruggeman | rna-NM_001178750.1_Bruggeman | cds-NP_009965.2_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:194190-195191:+ | gene-YCR036W_CAT1 | rna-NM_001178750.1_CAT1 | cds-NP_009965.2_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:181522-182523:+ | gene-YCR036W_CBS1585 | rna-NM_001178750.1_CBS1585 | cds-NP_009965.2_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:193169-194170:+ | gene-YCR036W_CBS436 | rna-NM_001178750.1_CBS436 | cds-NP_009965.2_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:175375-176376:+ | gene-YCR036W_CBS6412 | rna-NM_001178750.1_CBS6412 | cds-NP_009965.2_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:187699-188700:+ | gene-YCR036W_CBS6413 | rna-NM_001178750.1_CBS6413 | cds-NP_009965.2_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:192643-193644:+ | gene-YCR036W_CENPK1137D | rna-NM_001178750.1_CENPK1137D | cds-NP_009965.2_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:184522-185523:+ | gene-YCR036W_EthanolRed | rna-NM_001178750.1_EthanolRed | cds-NP_009965.2_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:187638-188639:+ | gene-YCR036W_FaliES1 | rna-NM_001178750.1_FaliES1 | cds-NP_009965.2_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000102.1:23917-24918:+ | gene-YCR036W_JAY291 | rna-NM_001178750.1_JAY291 | cds-NP_009965.2_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:180287-181288:+ | gene-YCR036W_MUCL30387 | rna-NM_001178750.1_MUCL30387 | cds-NP_009965.2_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:180078-181079:+ | gene-YCR036W_MUCL30388 | rna-NM_001178750.1_MUCL30388 | cds-NP_009965.2_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:187846-188847:+ | gene-YCR036W_MUCL39482 | rna-NM_001178750.1_MUCL39482 | cds-NP_009965.2_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:185641-186642:+ | gene-YCR036W_MUCL42920 | rna-NM_001178750.1_MUCL42920 | cds-NP_009965.2_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:192929-193930:+ | gene-YCR036W_NCIM3186 | rna-NM_001178750.1_NCIM3186 | cds-NP_009965.2_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:189610-190611:+ | gene-YCR036W_NCYC1407 | rna-NM_001178750.1_NCYC1407 | cds-NP_009965.2_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:198658-199659:+ | gene-YCR036W_PE2H3 | rna-NM_001178750.1_PE2H3 | cds-NP_009965.2_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:193278-194279:+ | gene-YCR036W_PE2H4 | rna-NM_001178750.1_PE2H4 | cds-NP_009965.2_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:193297-194298:+ | gene-YCR036W_S288C | rna-NM_001178750.1_S288C | cds-NP_009965.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000083.1:40806-41807:+ | gene-YCR036W_SA1 | rna-NM_001178750.1_SA1 | cds-NP_009965.2_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:188414-189415:+ | gene-YCR036W_ThermosaccDry | rna-NM_001178750.1_ThermosaccDry | cds-NP_009965.2_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:199434-200435:+ | gene-YCR036W_VR1 | rna-NM_001178750.1_VR1 | cds-NP_009965.2_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:186667-187668:+ | gene-YCR036W_ZTW1 | rna-NM_001178750.1_ZTW1 | cds-NP_009965.2_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:220828-221826:+ | gene-YCR036W_Sparadoxus | rna-NM_001178750.1_Sparadoxus | cds-NP_009965.2_Sparadoxus | 86.2 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |