Gene name: RBG1
Reference locus (S288C): YAL036C
Gene biotype: protein_coding
Description: Ribosome-interacting GTPase 1; Member of the DRG family of GTP-binding proteins; associates with translating ribosomes; interacts with Tma46p, Ygr250cp, Gir2p and Yap1p via two-hybrid; Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family
Top 10 interactors (score): TMA46 (0.999); GIR2 (0.999); YTM1 (0.987); RLI1 (0.928); NOP15 (0.914); RPB5 (0.904); TIM23 (0.896); SUI2 (0.896); GLN4 (0.895); MRT4 (0.893); BRX1 (0.885); PWP1 (0.838); TIF4631 (0.826); RSA4 (0.805); SUP45 (0.799); GCN1 (0.792); LIA1 (0.788); RBG2 (0.787); ENV7 (0.763); RIX7 (0.752)
Homologues (species, bitscore): DRG1 (Homo sapiens, 503.4); Drg1 (Mus musculus, 502.3); drg1 (Danio rerio, 501.1); drg1 (Xenopus tropicalis, 445.7); 128up (Drosophila melanogaster, 506.1); T28D6.6 (Caenorhabditis elegans, 491.5); AT4G39520 (Arabidopsis thaliana, 488.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:60173-61282:- | gene-YAL036C_AKU4011 | rna-NM_001178181.1_AKU4011 | cds-NP_009364.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000070.1:47300-48409:- | gene-YAL036C_BG1 | rna-NM_001178181.1_BG1 | cds-NP_009364.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:75051-76160:- | gene-YAL036C_Bruggeman | rna-NM_001178181.1_Bruggeman | cds-NP_009364.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:61392-62501:- | gene-YAL036C_CAT1 | rna-NM_001178181.1_CAT1 | cds-NP_009364.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:73190-74299:- | gene-YAL036C_CBS1585 | rna-NM_001178181.1_CBS1585 | cds-NP_009364.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:73439-74548:- | gene-YAL036C_CBS436 | rna-NM_001178181.1_CBS436 | cds-NP_009364.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:59336-60445:- | gene-YAL036C_CBS6412 | rna-NM_001178181.1_CBS6412 | cds-NP_009364.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:71455-72564:- | gene-YAL036C_CBS6413 | rna-NM_001178181.1_CBS6413 | cds-NP_009364.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:75133-76242:- | gene-YAL036C_CENPK1137D | rna-NM_001178181.1_CENPK1137D | cds-NP_009364.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:61581-62690:- | gene-YAL036C_EthanolRed | rna-NM_001178181.1_EthanolRed | cds-NP_009364.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:76204-77313:- | gene-YAL036C_FaliES1 | rna-NM_001178181.1_FaliES1 | cds-NP_009364.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000084.1:47484-48593:- | gene-YAL036C_JAY291 | rna-NM_001178181.1_JAY291 | cds-NP_009364.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:76139-77248:- | gene-YAL036C_MUCL30387 | rna-NM_001178181.1_MUCL30387 | cds-NP_009364.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:72689-73798:- | gene-YAL036C_MUCL30388 | rna-NM_001178181.1_MUCL30388 | cds-NP_009364.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:71976-73085:- | gene-YAL036C_MUCL39482 | rna-NM_001178181.1_MUCL39482 | cds-NP_009364.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:74347-75456:- | gene-YAL036C_MUCL42920 | rna-NM_001178181.1_MUCL42920 | cds-NP_009364.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:74920-76029:- | gene-YAL036C_NCIM3186 | rna-NM_001178181.1_NCIM3186 | cds-NP_009364.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:59854-60963:- | gene-YAL036C_NCYC1407 | rna-NM_001178181.1_NCYC1407 | cds-NP_009364.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:61754-62863:- | gene-YAL036C_PE2H3 | rna-NM_001178181.1_PE2H3 | cds-NP_009364.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:61473-62582:- | gene-YAL036C_PE2H4 | rna-NM_001178181.1_PE2H4 | cds-NP_009364.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:75043-76152:- | gene-YAL036C_S288C | rna-NM_001178181.1_S288C | cds-NP_009364.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000059.1:4165-5274:- | gene-YAL036C_SA1 | rna-NM_001178181.1_SA1 | cds-NP_009364.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:75722-76831:- | gene-YAL036C_ThermosaccDry | rna-NM_001178181.1_ThermosaccDry | cds-NP_009364.1_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:77008-78117:- | gene-YAL036C_VR1 | rna-NM_001178181.1_VR1 | cds-NP_009364.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:47542-48651:- | gene-YAL036C_ZTW1 | rna-NM_001178181.1_ZTW1 | cds-NP_009364.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:65154-66263:- | gene-YAL036C_Sparadoxus | rna-NM_001178181.1_Sparadoxus | cds-NP_009364.1_Sparadoxus | 92.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |