Gene name: RAD61
Reference locus (S288C): YDR014W
Gene biotype: protein_coding
Description: Protein RAD61; Subunit of a complex that inhibits sister chromatid cohesion; also negatively regulates chromosome condensation; inhibited by Eco1p-acetylated cohesin subunits Smc3p and Mcd1p; binds Smc3p ATPase head of cohesin; related to the human Wapl protein that controls the association of cohesin with chromatin
Top 10 interactors (score): SMC3 (0.999); PDS5 (0.998); ECO1 (0.995); MCD1 (0.977); IRR1 (0.957); SMC1 (0.922); CTF3 (0.891); SCC4 (0.882); CHL1 (0.871); MCM16 (0.837); CTF18 (0.833); MCM21 (0.824); CTF19 (0.819); CTF4 (0.818); MCM22 (0.815); IML3 (0.795); RAD52 (0.788); CTF8 (0.751); ESP1 (0.75); RAD6 (0.747)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:459918-461861:+ | gene-YDR014W_AKU4011 | rna-NM_001180322.1_AKU4011 | cds-NP_010297.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:87878-89812:- | gene-YDR014W_BG1 | rna-NM_001180322.1_BG1 | cds-NP_010297.1_BG1 | 98.8 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:488218-490161:+ | gene-YDR014W_Bruggeman | rna-NM_001180322.1_Bruggeman | cds-NP_010297.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:473272-475215:+ | gene-YDR014W_CAT1 | rna-NM_001180322.1_CAT1 | cds-NP_010297.1_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:456509-458452:+ | gene-YDR014W_CBS1585 | rna-NM_001180322.1_CBS1585 | cds-NP_010297.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:473549-475492:+ | gene-YDR014W_CBS436 | rna-NM_001180322.1_CBS436 | cds-NP_010297.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:453419-455362:+ | gene-YDR014W_CBS6412 | rna-NM_001180322.1_CBS6412 | cds-NP_010297.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:475698-477641:+ | gene-YDR014W_CBS6413 | rna-NM_001180322.1_CBS6413 | cds-NP_010297.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:473012-474955:+ | gene-YDR014W_CENPK1137D | rna-NM_001180322.1_CENPK1137D | cds-NP_010297.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:467940-469883:+ | gene-YDR014W_EthanolRed | rna-NM_001180322.1_EthanolRed | cds-NP_010297.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:474299-476242:+ | gene-YDR014W_FaliES1 | rna-NM_001180322.1_FaliES1 | cds-NP_010297.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000042.1:37307-39250:- | gene-YDR014W_JAY291 | rna-NM_001180322.1_JAY291 | cds-NP_010297.1_JAY291 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:473798-475741:+ | gene-YDR014W_MUCL30387 | rna-NM_001180322.1_MUCL30387 | cds-NP_010297.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:464260-466203:+ | gene-YDR014W_MUCL30388 | rna-NM_001180322.1_MUCL30388 | cds-NP_010297.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:457878-459821:+ | gene-YDR014W_MUCL39482 | rna-NM_001180322.1_MUCL39482 | cds-NP_010297.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:379583-381526:+ | gene-YDR014W_MUCL42920 | rna-NM_001180322.1_MUCL42920 | cds-NP_010297.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:473969-475912:+ | gene-YDR014W_NCIM3186 | rna-NM_001180322.1_NCIM3186 | cds-NP_010297.1_NCIM3186 | 85.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:457327-459270:+ | gene-YDR014W_NCYC1407 | rna-NM_001180322.1_NCYC1407 | cds-NP_010297.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:472441-474384:+ | gene-YDR014W_PE2H3 | rna-NM_001180322.1_PE2H3 | cds-NP_010297.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:471746-473689:+ | gene-YDR014W_PE2H4 | rna-NM_001180322.1_PE2H4 | cds-NP_010297.1_PE2H4 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:474046-475989:+ | gene-YDR014W_S288C | rna-NM_001180322.1_S288C | cds-NP_010297.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000065.1:1220-3163:+ | gene-YDR014W_SA1 | rna-NM_001180322.1_SA1 | cds-NP_010297.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:473778-475721:+ | gene-YDR014W_ThermosaccDry | rna-NM_001180322.1_ThermosaccDry | cds-NP_010297.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:478392-480335:+ | gene-YDR014W_VR1 | rna-NM_001180322.1_VR1 | cds-NP_010297.1_VR1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:471673-473616:+ | gene-YDR014W_ZTW1 | rna-NM_001180322.1_ZTW1 | cds-NP_010297.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:475853-477796:+ | gene-YDR014W_Sparadoxus | rna-NM_001180322.1_Sparadoxus | cds-NP_010297.1_Sparadoxus | 84.8 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |