Gene name: RAD57
Reference locus (S288C): YDR004W
Gene biotype: protein_coding
Description: Putative dna-dependent atpase rad57; DNA repair protein RAD57; Protein that stimulates strand exchange; stimulates strand exchange by stabilizing the binding of Rad51p to single-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; forms heterodimer with Rad55p; Belongs to the RecA family
Top 10 interactors (score): RAD55 (0.999); SGS1 (0.999); RAD52 (0.998); SRS2 (0.998); RAD54 (0.998); RAD51 (0.997); MUS81 (0.989); RAD59 (0.989); RAD27 (0.98); DMC1 (0.98); RDH54 (0.972); SPO11 (0.97); DNL4 (0.968); REV3 (0.967); TOP3 (0.952); RTT107 (0.947); RAD24 (0.942); RAD10 (0.936); YKU70 (0.933); MEC1 (0.931)
Homologues (species, bitscore): RAD51B (Homo sapiens, 92.4); Xrcc3 (Mus musculus, 83.6); xrcc3 (Danio rerio, 98.2); xrcc3 (Xenopus tropicalis, 98.6); spn-B (Drosophila melanogaster, 90.1); rad-51 (Caenorhabditis elegans, 81.3); RAD51C (Arabidopsis thaliana, 84.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:440452-441834:+ | gene-YDR004W_AKU4011 | rna-NM_001180312.1_AKU4011 | cds-NP_010287.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:107317-108699:- | gene-YDR004W_BG1 | rna-NM_001180312.1_BG1 | cds-NP_010287.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:461058-462440:+ | gene-YDR004W_Bruggeman | rna-NM_001180312.1_Bruggeman | cds-NP_010287.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:453903-455285:+ | gene-YDR004W_CAT1 | rna-NM_001180312.1_CAT1 | cds-NP_010287.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:437664-439046:+ | gene-YDR004W_CBS1585 | rna-NM_001180312.1_CBS1585 | cds-NP_010287.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:454433-455815:+ | gene-YDR004W_CBS436 | rna-NM_001180312.1_CBS436 | cds-NP_010287.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:434911-436293:+ | gene-YDR004W_CBS6412 | rna-NM_001180312.1_CBS6412 | cds-NP_010287.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:456602-457984:+ | gene-YDR004W_CBS6413 | rna-NM_001180312.1_CBS6413 | cds-NP_010287.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:454064-455446:+ | gene-YDR004W_CENPK1137D | rna-NM_001180312.1_CENPK1137D | cds-NP_010287.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:449283-450665:+ | gene-YDR004W_EthanolRed | rna-NM_001180312.1_EthanolRed | cds-NP_010287.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:455454-456836:+ | gene-YDR004W_FaliES1 | rna-NM_001180312.1_FaliES1 | cds-NP_010287.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000442.1:15209-16591:- | gene-YDR004W_JAY291 | rna-NM_001180312.1_JAY291 | cds-NP_010287.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:454931-456313:+ | gene-YDR004W_MUCL30387 | rna-NM_001180312.1_MUCL30387 | cds-NP_010287.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:445391-446773:+ | gene-YDR004W_MUCL30388 | rna-NM_001180312.1_MUCL30388 | cds-NP_010287.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:439033-440415:+ | gene-YDR004W_MUCL39482 | rna-NM_001180312.1_MUCL39482 | cds-NP_010287.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:360464-361846:+ | gene-YDR004W_MUCL42920 | rna-NM_001180312.1_MUCL42920 | cds-NP_010287.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:455124-456506:+ | gene-YDR004W_NCIM3186 | rna-NM_001180312.1_NCIM3186 | cds-NP_010287.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:437955-439337:+ | gene-YDR004W_NCYC1407 | rna-NM_001180312.1_NCYC1407 | cds-NP_010287.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:453584-454966:+ | gene-YDR004W_PE2H3 | rna-NM_001180312.1_PE2H3 | cds-NP_010287.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:452875-454257:+ | gene-YDR004W_PE2H4 | rna-NM_001180312.1_PE2H4 | cds-NP_010287.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:455201-456583:+ | gene-YDR004W_S288C | rna-NM_001180312.1_S288C | cds-NP_010287.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000099.1:15384-16766:- | gene-YDR004W_SA1 | rna-NM_001180312.1_SA1 | cds-NP_010287.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:454933-456315:+ | gene-YDR004W_ThermosaccDry | rna-NM_001180312.1_ThermosaccDry | cds-NP_010287.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:459373-460755:+ | gene-YDR004W_VR1 | rna-NM_001180312.1_VR1 | cds-NP_010287.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:452830-454212:+ | gene-YDR004W_ZTW1 | rna-NM_001180312.1_ZTW1 | cds-NP_010287.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:457171-458556:+ | gene-YDR004W_Sparadoxus | rna-NM_001180312.1_Sparadoxus | cds-NP_010287.1_Sparadoxus | 89.7 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |