Gene name: RAD55
Reference locus (S288C): YDR076W
Gene biotype: protein_coding
Description: Putative dna-dependent atpase rad55; DNA repair protein RAD55; Protein that stimulates strand exchange; stimulates strand exchange by stabilizing the binding of Rad51p to single-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; forms heterodimer with Rad57p; Belongs to the RecA family. RAD55 subfamily
Top 10 interactors (score): RAD57 (0.999); RAD51 (0.998); RAD54 (0.994); SRS2 (0.99); RAD52 (0.987); CSM2 (0.957); SGS1 (0.956); RAD59 (0.955); RAD5 (0.912); RAD53 (0.907); MEC1 (0.906); RTT107 (0.906); RDH54 (0.899); REV3 (0.897); SHU2 (0.878); PSY3 (0.866); TOP3 (0.864); POL32 (0.85); RAD27 (0.847); ELG1 (0.841)
Homologues (species, bitscore): Rad51b (Mus musculus, 50.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:575997-577217:+ | gene-YDR076W_AKU4011 | rna-NM_001180384.3_AKU4011 | cds-NP_010361.3_AKU4011 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:548143-549363:- | gene-YDR076W_BG1 | rna-NM_001180384.3_BG1 | cds-NP_010361.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:608294-609514:+ | gene-YDR076W_Bruggeman | rna-NM_001180384.3_Bruggeman | cds-NP_010361.3_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:591872-593092:+ | gene-YDR076W_CAT1 | rna-NM_001180384.3_CAT1 | cds-NP_010361.3_CAT1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:566951-568171:+ | gene-YDR076W_CBS1585 | rna-NM_001180384.3_CBS1585 | cds-NP_010361.3_CBS1585 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:592109-593329:+ | gene-YDR076W_CBS436 | rna-NM_001180384.3_CBS436 | cds-NP_010361.3_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:563362-564582:+ | gene-YDR076W_CBS6412 | rna-NM_001180384.3_CBS6412 | cds-NP_010361.3_CBS6412 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:592027-593247:+ | gene-YDR076W_CBS6413 | rna-NM_001180384.3_CBS6413 | cds-NP_010361.3_CBS6413 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:597479-598699:+ | gene-YDR076W_CENPK1137D | rna-NM_001180384.3_CENPK1137D | cds-NP_010361.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:577852-579072:+ | gene-YDR076W_EthanolRed | rna-NM_001180384.3_EthanolRed | cds-NP_010361.3_EthanolRed | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:584592-585812:+ | gene-YDR076W_FaliES1 | rna-NM_001180384.3_FaliES1 | cds-NP_010361.3_FaliES1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000358.1:45329-46549:- | gene-YDR076W_JAY291 | rna-NM_001180384.3_JAY291 | cds-NP_010361.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:592977-594197:+ | gene-YDR076W_MUCL30387 | rna-NM_001180384.3_MUCL30387 | cds-NP_010361.3_MUCL30387 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:583376-584596:+ | gene-YDR076W_MUCL30388 | rna-NM_001180384.3_MUCL30388 | cds-NP_010361.3_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:568317-569537:+ | gene-YDR076W_MUCL39482 | rna-NM_001180384.3_MUCL39482 | cds-NP_010361.3_MUCL39482 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:499030-500250:+ | gene-YDR076W_MUCL42920 | rna-NM_001180384.3_MUCL42920 | cds-NP_010361.3_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:598391-599611:+ | gene-YDR076W_NCIM3186 | rna-NM_001180384.3_NCIM3186 | cds-NP_010361.3_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:567242-568462:+ | gene-YDR076W_NCYC1407 | rna-NM_001180384.3_NCYC1407 | cds-NP_010361.3_NCYC1407 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:586899-588119:+ | gene-YDR076W_PE2H3 | rna-NM_001180384.3_PE2H3 | cds-NP_010361.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:586204-587424:+ | gene-YDR076W_PE2H4 | rna-NM_001180384.3_PE2H4 | cds-NP_010361.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:598468-599688:+ | gene-YDR076W_S288C | rna-NM_001180384.3_S288C | cds-NP_010361.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000011.1:45820-47040:- | gene-YDR076W_SA1 | rna-NM_001180384.3_SA1 | cds-NP_010361.3_SA1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:583969-585189:+ | gene-YDR076W_ThermosaccDry | rna-NM_001180384.3_ThermosaccDry | cds-NP_010361.3_ThermosaccDry | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:596696-597916:+ | gene-YDR076W_VR1 | rna-NM_001180384.3_VR1 | cds-NP_010361.3_VR1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:581597-582817:+ | gene-YDR076W_ZTW1 | rna-NM_001180384.3_ZTW1 | cds-NP_010361.3_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:586433-587653:+ | gene-YDR076W_Sparadoxus | rna-NM_001180384.3_Sparadoxus | cds-NP_010361.3_Sparadoxus | 89.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |