Gene name: RAD52
Reference locus (S288C): YML032C
Gene biotype: protein_coding
Description: DNA repair and recombination protein RAD52; Protein that stimulates strand exchange; stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA; anneals complementary single-stranded DNA; involved in the repair of double-strand breaks in DNA during vegetative growth and meiosis and UV induced sister chromatid recombination; Belongs to the RAD52 family
Top 10 interactors (score): RFA1 (0.999); SRS2 (0.999); SGS1 (0.999); RAD51 (0.999); RFA2 (0.999); RAD54 (0.998); MEC1 (0.998); UBC9 (0.998); RAD57 (0.998); YKU70 (0.998); RAD59 (0.998); MUS81 (0.997); RAD1 (0.997); REV3 (0.996); DNL4 (0.995); RAD18 (0.995); SMT3 (0.995); RAD6 (0.994); DNA2 (0.994); RAD5 (0.991)
Homologues (species, bitscore): RAD52 (Homo sapiens, 173.7); Rad52 (Mus musculus, 176.8); rad52 (Danio rerio, 172.6); rad52 (Xenopus tropicalis, 170.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:262108-263523:- | gene-YML032C_AKU4011 | rna-NM_001182390.1_AKU4011 | cds-NP_013680.2_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:279347-280762:+ | gene-YML032C_BG1 | rna-NM_001182390.1_BG1 | cds-NP_013680.2_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:202062-203477:- | gene-YML032C_Bruggeman | rna-NM_001182390.1_Bruggeman | cds-NP_013680.2_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:204576-205991:- | gene-YML032C_CAT1 | rna-NM_001182390.1_CAT1 | cds-NP_013680.2_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:195057-196472:- | gene-YML032C_CBS1585 | rna-NM_001182390.1_CBS1585 | cds-NP_013680.2_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:200596-202011:- | gene-YML032C_CBS436 | rna-NM_001182390.1_CBS436 | cds-NP_013680.2_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:308796-310211:- | gene-YML032C_CBS6412 | rna-NM_001182390.1_CBS6412 | cds-NP_013680.2_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:194315-195730:- | gene-YML032C_CBS6413 | rna-NM_001182390.1_CBS6413 | cds-NP_013680.2_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:207037-208452:- | gene-YML032C_CENPK1137D | rna-NM_001182390.1_CENPK1137D | cds-NP_013680.2_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:195084-196499:- | gene-YML032C_EthanolRed | rna-NM_001182390.1_EthanolRed | cds-NP_013680.2_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:198048-199463:- | gene-YML032C_FaliES1 | rna-NM_001182390.1_FaliES1 | cds-NP_013680.2_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000237.1:12674-14089:+ | gene-YML032C_JAY291 | rna-NM_001182390.1_JAY291 | cds-NP_013680.2_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:199795-201210:- | gene-YML032C_MUCL30387 | rna-NM_001182390.1_MUCL30387 | cds-NP_013680.2_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:203772-205187:- | gene-YML032C_MUCL30388 | rna-NM_001182390.1_MUCL30388 | cds-NP_013680.2_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:195343-196758:- | gene-YML032C_MUCL39482 | rna-NM_001182390.1_MUCL39482 | cds-NP_013680.2_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:200901-202316:- | gene-YML032C_MUCL42920 | rna-NM_001182390.1_MUCL42920 | cds-NP_013680.2_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:212469-213884:- | gene-YML032C_NCIM3186 | rna-NM_001182390.1_NCIM3186 | cds-NP_013680.2_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:195286-196701:- | gene-YML032C_NCYC1407 | rna-NM_001182390.1_NCYC1407 | cds-NP_013680.2_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:201187-202602:- | gene-YML032C_PE2H3 | rna-NM_001182390.1_PE2H3 | cds-NP_013680.2_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:207282-208697:- | gene-YML032C_PE2H4 | rna-NM_001182390.1_PE2H4 | cds-NP_013680.2_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:212515-213930:- | gene-YML032C_S288C | rna-NM_001182390.1_S288C | cds-NP_013680.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000088.1:24919-26334:+ | gene-YML032C_SA1 | rna-NM_001182390.1_SA1 | cds-NP_013680.2_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:195121-196536:- | gene-YML032C_ThermosaccDry | rna-NM_001182390.1_ThermosaccDry | cds-NP_013680.2_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:199128-200543:- | gene-YML032C_VR1 | rna-NM_001182390.1_VR1 | cds-NP_013680.2_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:174174-175589:- | gene-YML032C_ZTW1 | rna-NM_001182390.1_ZTW1 | cds-NP_013680.2_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:205916-207337:- | gene-YML032C_Sparadoxus | rna-NM_001182390.1_Sparadoxus | cds-NP_013680.2_Sparadoxus | 89.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |