Gene name: RAD34
Reference locus (S288C): YDR314C
Gene biotype: protein_coding
Description: Dna repair protein rad34; Protein involved in nucleotide excision repair (NER); homologous to RAD4
Top 10 interactors (score): RAD23 (0.985); TFB1 (0.967); RAD33 (0.961); CDC31 (0.953); UBC9 (0.903); SSL1 (0.901); RAD14 (0.897); RAD1 (0.897); RAD10 (0.892); RAD2 (0.892); SSL2 (0.889); RAD26 (0.886); SMT3 (0.883); RAD7 (0.864); RAD3 (0.806); RAD4 (0.776); MSH6 (0.773); CMR1 (0.766); MLH1 (0.727); RAD28 (0.713)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1042419-1044497:- | gene-YDR314C_AKU4011 | rna-NM_001180622.1_AKU4011 | cds-NP_010600.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:87061-89139:+ | gene-YDR314C_BG1 | rna-NM_001180622.1_BG1 | cds-NP_010600.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1069687-1071765:- | gene-YDR314C_Bruggeman | rna-NM_001180622.1_Bruggeman | cds-NP_010600.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1056693-1058771:- | gene-YDR314C_CAT1 | rna-NM_001180622.1_CAT1 | cds-NP_010600.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1036864-1038942:- | gene-YDR314C_CBS1585 | rna-NM_001180622.1_CBS1585 | cds-NP_010600.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1055235-1057313:- | gene-YDR314C_CBS436 | rna-NM_001180622.1_CBS436 | cds-NP_010600.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1033551-1035629:- | gene-YDR314C_CBS6412 | rna-NM_001180622.1_CBS6412 | cds-NP_010600.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1054784-1056862:- | gene-YDR314C_CBS6413 | rna-NM_001180622.1_CBS6413 | cds-NP_010600.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1089071-1091149:- | gene-YDR314C_CENPK1137D | rna-NM_001180622.1_CENPK1137D | cds-NP_010600.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:217961-220039:- | gene-YDR314C_EthanolRed | rna-NM_001180622.1_EthanolRed | cds-NP_010600.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1049176-1051254:- | gene-YDR314C_FaliES1 | rna-NM_001180622.1_FaliES1 | cds-NP_010600.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000386.1:1676-3754:- | gene-YDR314C_JAY291 | rna-NM_001180622.1_JAY291 | cds-NP_010600.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1055198-1057276:- | gene-YDR314C_MUCL30387 | rna-NM_001180622.1_MUCL30387 | cds-NP_010600.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1042273-1044351:- | gene-YDR314C_MUCL30388 | rna-NM_001180622.1_MUCL30388 | cds-NP_010600.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1028671-1030749:- | gene-YDR314C_MUCL39482 | rna-NM_001180622.1_MUCL39482 | cds-NP_010600.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:969817-971895:- | gene-YDR314C_MUCL42920 | rna-NM_001180622.1_MUCL42920 | cds-NP_010600.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1090356-1092434:- | gene-YDR314C_NCIM3186 | rna-NM_001180622.1_NCIM3186 | cds-NP_010600.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1041963-1044041:- | gene-YDR314C_NCYC1407 | rna-NM_001180622.1_NCYC1407 | cds-NP_010600.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1052951-1055029:- | gene-YDR314C_PE2H3 | rna-NM_001180622.1_PE2H3 | cds-NP_010600.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1058536-1060614:- | gene-YDR314C_PE2H4 | rna-NM_001180622.1_PE2H4 | cds-NP_010600.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1090433-1092511:- | gene-YDR314C_S288C | rna-NM_001180622.1_S288C | cds-NP_010600.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000025.1:67180-69258:- | gene-YDR314C_SA1 | rna-NM_001180622.1_SA1 | cds-NP_010600.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1053449-1055527:- | gene-YDR314C_ThermosaccDry | rna-NM_001180622.1_ThermosaccDry | cds-NP_010600.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1069368-1071446:- | gene-YDR314C_VR1 | rna-NM_001180622.1_VR1 | cds-NP_010600.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:97564-99642:- | gene-YDR314C_ZTW1 | rna-NM_001180622.1_ZTW1 | cds-NP_010600.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1048976-1051064:- | gene-YDR314C_Sparadoxus | rna-NM_001180622.1_Sparadoxus | cds-NP_010600.1_Sparadoxus | 85.5 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |