Gene name: RAD26
Reference locus (S288C): YJR035W
Gene biotype: protein_coding
Description: DNA repair and recombination protein RAD26; Protein involved in transcription-coupled nucleotide excision repair; repairs UV-induced DNA lesions; recruitment to DNA lesions is dependent on an elongating RNA polymerase II; homolog of human CSB protein; Belongs to the SNF2/RAD54 helicase family
Top 10 interactors (score): RPB9 (0.999); RPO21 (0.998); RAD7 (0.998); RPB2 (0.997); RAD14 (0.997); RPB4 (0.995); DEF1 (0.99); RAD2 (0.988); RAD4 (0.985); RAD3 (0.984); RPB7 (0.983); RPB3 (0.983); RPO26 (0.979); DST1 (0.975); RPB5 (0.974); RPB11 (0.972); RPC10 (0.971); RPB10 (0.971); RPB8 (0.971); RAD23 (0.966)
Homologues (species, bitscore): ERCC6 (Homo sapiens, 638.6); Ercc6 (Mus musculus, 633.6); ercc6 (Danio rerio, 656.4); ercc6 (Xenopus tropicalis, 538.9); Hel89B (Drosophila melanogaster, 292.0); csb-1 (Caenorhabditis elegans, 344.0); CHR8 (Arabidopsis thaliana, 679.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:469053-472310:+ | gene-YJR035W_AKU4011 | rna-NM_001181693.1_AKU4011 | cds-NP_012569.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:140643-143900:- | gene-YJR035W_BG1 | rna-NM_001181693.1_BG1 | cds-NP_012569.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:483091-486348:+ | gene-YJR035W_Bruggeman | rna-NM_001181693.1_Bruggeman | cds-NP_012569.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:487021-490278:+ | gene-YJR035W_CAT1 | rna-NM_001181693.1_CAT1 | cds-NP_012569.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:480632-483889:+ | gene-YJR035W_CBS1585 | rna-NM_001181693.1_CBS1585 | cds-NP_012569.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:499582-502839:+ | gene-YJR035W_CBS436 | rna-NM_001181693.1_CBS436 | cds-NP_012569.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:468838-472095:+ | gene-YJR035W_CBS6412 | rna-NM_001181693.1_CBS6412 | cds-NP_012569.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:471083-474340:+ | gene-YJR035W_CBS6413 | rna-NM_001181693.1_CBS6413 | cds-NP_012569.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:479723-482980:+ | gene-YJR035W_CENPK1137D | rna-NM_001181693.1_CENPK1137D | cds-NP_012569.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:473983-477240:+ | gene-YJR035W_EthanolRed | rna-NM_001181693.1_EthanolRed | cds-NP_012569.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:485200-488457:+ | gene-YJR035W_FaliES1 | rna-NM_001181693.1_FaliES1 | cds-NP_012569.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000250.1:50-3307:+ | gene-YJR035W_JAY291 | rna-NM_001181693.1_JAY291 | cds-NP_012569.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:483401-486658:+ | gene-YJR035W_MUCL30387 | rna-NM_001181693.1_MUCL30387 | cds-NP_012569.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:479948-483205:+ | gene-YJR035W_MUCL30388 | rna-NM_001181693.1_MUCL30388 | cds-NP_012569.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:474092-477349:+ | gene-YJR035W_MUCL39482 | rna-NM_001181693.1_MUCL39482 | cds-NP_012569.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:479355-482612:+ | gene-YJR035W_MUCL42920 | rna-NM_001181693.1_MUCL42920 | cds-NP_012569.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:497334-500591:+ | gene-YJR035W_NCIM3186 | rna-NM_001181693.1_NCIM3186 | cds-NP_012569.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:471935-475192:+ | gene-YJR035W_NCYC1407 | rna-NM_001181693.1_NCYC1407 | cds-NP_012569.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:490271-493528:+ | gene-YJR035W_PE2H3 | rna-NM_001181693.1_PE2H3 | cds-NP_012569.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:483967-487224:+ | gene-YJR035W_PE2H4 | rna-NM_001181693.1_PE2H4 | cds-NP_012569.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:497355-500612:+ | gene-YJR035W_S288C | rna-NM_001181693.1_S288C | cds-NP_012569.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:281862-285119:+ | gene-YJR035W_SA1 | rna-NM_001181693.1_SA1 | cds-NP_012569.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:478888-482145:+ | gene-YJR035W_ThermosaccDry | rna-NM_001181693.1_ThermosaccDry | cds-NP_012569.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:481121-484378:+ | gene-YJR035W_VR1 | rna-NM_001181693.1_VR1 | cds-NP_012569.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:458774-462031:+ | gene-YJR035W_ZTW1 | rna-NM_001181693.1_ZTW1 | cds-NP_012569.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:483508-486765:+ | gene-YJR035W_Sparadoxus | rna-NM_001181693.1_Sparadoxus | cds-NP_012569.1_Sparadoxus | 88.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |