Gene name: RAD14
Reference locus (S288C): YMR201C
Gene biotype: protein_coding
Description: Dna-repair protein complementing xp-a cells; Protein that recognizes and binds damaged DNA during NER; subunit of Nucleotide Excision Repair Factor 1 (NEF1); contains zinc finger motif; homolog of human XPA protein; NER stands for nucleotide excision repair
Top 10 interactors (score): RAD4 (0.999); RAD10 (0.999); RAD1 (0.999); RAD3 (0.998); RAD2 (0.998); RAD26 (0.997); RAD23 (0.997); RFA2 (0.996); SSL2 (0.994); TFB2 (0.988); RAD7 (0.988); MSH2 (0.987); SSL1 (0.984); REV3 (0.984); RAD16 (0.982); TFB1 (0.981); RFA1 (0.978); APN1 (0.976); TFB4 (0.974); TFB5 (0.974)
Homologues (species, bitscore): XPA (Homo sapiens, 81.3); Xpa (Mus musculus, 80.9); xpa (Danio rerio, 83.6); xpa (Xenopus tropicalis, 50.8); Xpac (Drosophila melanogaster, 82.0); xpa-1 (Caenorhabditis elegans, 69.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:705758-706957:- | gene-YMR201C_AKU4011 | rna-NM_001182708.1_AKU4011 | cds-NP_013928.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:247626-248825:+ | gene-YMR201C_BG1 | rna-NM_001182708.1_BG1 | cds-NP_013928.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:649984-651184:- | gene-YMR201C_Bruggeman | rna-NM_001182708.1_Bruggeman | cds-NP_013928.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:653237-654436:- | gene-YMR201C_CAT1 | rna-NM_001182708.1_CAT1 | cds-NP_013928.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:638014-639213:- | gene-YMR201C_CBS1585 | rna-NM_001182708.1_CBS1585 | cds-NP_013928.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:642283-643482:- | gene-YMR201C_CBS436 | rna-NM_001182708.1_CBS436 | cds-NP_013928.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:749572-750771:- | gene-YMR201C_CBS6412 | rna-NM_001182708.1_CBS6412 | cds-NP_013928.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:637164-638363:- | gene-YMR201C_CBS6413 | rna-NM_001182708.1_CBS6413 | cds-NP_013928.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:660534-661733:- | gene-YMR201C_CENPK1137D | rna-NM_001182708.1_CENPK1137D | cds-NP_013928.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:698206-699405:- | gene-YMR201C_EthanolRed | rna-NM_001182708.1_EthanolRed | cds-NP_013928.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:643860-645059:- | gene-YMR201C_FaliES1 | rna-NM_001182708.1_FaliES1 | cds-NP_013928.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000141.1:140943-142142:+ | gene-YMR201C_JAY291 | rna-NM_001182708.1_JAY291 | cds-NP_013928.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:643531-644731:- | gene-YMR201C_MUCL30387 | rna-NM_001182708.1_MUCL30387 | cds-NP_013928.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:650306-651506:- | gene-YMR201C_MUCL30388 | rna-NM_001182708.1_MUCL30388 | cds-NP_013928.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:639086-640285:- | gene-YMR201C_MUCL39482 | rna-NM_001182708.1_MUCL39482 | cds-NP_013928.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:646426-647626:- | gene-YMR201C_MUCL42920 | rna-NM_001182708.1_MUCL42920 | cds-NP_013928.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:665799-666998:- | gene-YMR201C_NCIM3186 | rna-NM_001182708.1_NCIM3186 | cds-NP_013928.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:638737-639936:- | gene-YMR201C_NCYC1407 | rna-NM_001182708.1_NCYC1407 | cds-NP_013928.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:648596-649795:- | gene-YMR201C_PE2H3 | rna-NM_001182708.1_PE2H3 | cds-NP_013928.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:649614-650813:- | gene-YMR201C_PE2H4 | rna-NM_001182708.1_PE2H4 | cds-NP_013928.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:665845-667044:- | gene-YMR201C_S288C | rna-NM_001182708.1_S288C | cds-NP_013928.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:141067-142266:+ | gene-YMR201C_SA1 | rna-NM_001182708.1_SA1 | cds-NP_013928.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:639987-641187:- | gene-YMR201C_ThermosaccDry | rna-NM_001182708.1_ThermosaccDry | cds-NP_013928.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:653129-654328:- | gene-YMR201C_VR1 | rna-NM_001182708.1_VR1 | cds-NP_013928.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:55764-56963:- | gene-YMR201C_ZTW1 | rna-NM_001182708.1_ZTW1 | cds-NP_013928.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:657905-659098:- | gene-YMR201C_Sparadoxus | rna-NM_001182708.1_Sparadoxus | cds-NP_013928.1_Sparadoxus | 88.9 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |