Gene name: QRI7
Reference locus (S288C): YDL104C
Gene biotype: protein_coding
Description: tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Protein involved in threonylcarbamoyl adenosine biosynthesis; Sua5p and Qri7p are necessary and sufficient for RNA t6A modification in vitro; highly conserved mitochondrial protein; essential for t6A modification of mitochondrial tRNAs that decode ANN codons; similar to Kae1p and E. coli YgjD, both of which are also required for tRNA t6A modification; when directed to the cytoplasm, complements the essential function of Kae1p in the KEOPS complex
Top 10 interactors (score): SUA5 (0.996); BUD32 (0.99); CGI121 (0.984); PDS5 (0.97); PCC1 (0.882); THS1 (0.857); MST1 (0.847); GON7 (0.836); KAE1 (0.826); MSW1 (0.822); TRM5 (0.796); AIM2 (0.743); AIM41 (0.742); MTG2 (0.738); MOD5 (0.734); NNR1 (0.719); YNL144C (0.706); PUF3 (0.703); DOT1 (0.691); PET309 (0.69)
Homologues (species, bitscore): OSGEPL1 (Homo sapiens, 134.0); Osgepl1 (Mus musculus, 127.5); osgepl1 (Danio rerio, 141.4); osgepl1 (Xenopus tropicalis, 124.8); CG14231 (Drosophila melanogaster, 127.9); osgl-1 (Caenorhabditis elegans, 115.2); GCP1 (Arabidopsis thaliana, 133.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:258274-259484:- | gene-YDL104C_AKU4011 | rna-NM_001180163.1_AKU4011 | cds-NP_010179.1_AKU4011 | 98.1 | 98.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:290457-291680:+ | gene-YDL104C_BG1 | rna-NM_001180163.1_BG1 | cds-NP_010179.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:275693-276910:- | gene-YDL104C_Bruggeman | rna-NM_001180163.1_Bruggeman | cds-NP_010179.1_Bruggeman | 98.8 | 99.5 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:272424-273647:- | gene-YDL104C_CAT1 | rna-NM_001180163.1_CAT1 | cds-NP_010179.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:256538-257755:- | gene-YDL104C_CBS1585 | rna-NM_001180163.1_CBS1585 | cds-NP_010179.1_CBS1585 | 98.7 | 99.5 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:273203-274426:- | gene-YDL104C_CBS436 | rna-NM_001180163.1_CBS436 | cds-NP_010179.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:254982-256183:- | gene-YDL104C_CBS6412 | rna-NM_001180163.1_CBS6412 | cds-NP_010179.1_CBS6412 | 97.2 | 98.2 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:274585-275808:- | gene-YDL104C_CBS6413 | rna-NM_001180163.1_CBS6413 | cds-NP_010179.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:272459-273682:- | gene-YDL104C_CENPK1137D | rna-NM_001180163.1_CENPK1137D | cds-NP_010179.1_CENPK1137D | 98.8 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:269294-270517:- | gene-YDL104C_EthanolRed | rna-NM_001180163.1_EthanolRed | cds-NP_010179.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:275266-276489:- | gene-YDL104C_FaliES1 | rna-NM_001180163.1_FaliES1 | cds-NP_010179.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000010.1:45316-46539:- | gene-YDL104C_JAY291 | rna-NM_001180163.1_JAY291 | cds-NP_010179.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:273480-274673:- | gene-YDL104C_MUCL30387 | rna-NM_001180163.1_MUCL30387 | cds-NP_010179.1_MUCL30387 | 96.8 | 97.5 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:264225-265448:- | gene-YDL104C_MUCL30388 | rna-NM_001180163.1_MUCL30388 | cds-NP_010179.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:257644-258861:- | gene-YDL104C_MUCL39482 | rna-NM_001180163.1_MUCL39482 | cds-NP_010179.1_MUCL39482 | 98.7 | 99.5 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:179406-180629:- | gene-YDL104C_MUCL42920 | rna-NM_001180163.1_MUCL42920 | cds-NP_010179.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:273576-274799:- | gene-YDL104C_NCIM3186 | rna-NM_001180163.1_NCIM3186 | cds-NP_010179.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:257666-258876:- | gene-YDL104C_NCYC1407 | rna-NM_001180163.1_NCYC1407 | cds-NP_010179.1_NCYC1407 | 98.0 | 98.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:264433-265656:- | gene-YDL104C_PE2H3 | rna-NM_001180163.1_PE2H3 | cds-NP_010179.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:264437-265660:- | gene-YDL104C_PE2H4 | rna-NM_001180163.1_PE2H4 | cds-NP_010179.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:273653-274876:- | gene-YDL104C_S288C | rna-NM_001180163.1_S288C | cds-NP_010179.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:160046-161269:+ | gene-YDL104C_SA1 | rna-NM_001180163.1_SA1 | cds-NP_010179.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:274777-276000:- | gene-YDL104C_ThermosaccDry | rna-NM_001180163.1_ThermosaccDry | cds-NP_010179.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:276855-278078:- | gene-YDL104C_VR1 | rna-NM_001180163.1_VR1 | cds-NP_010179.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:272702-273925:- | gene-YDL104C_ZTW1 | rna-NM_001180163.1_ZTW1 | cds-NP_010179.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:274829-276052:- | gene-YDL104C_Sparadoxus | rna-NM_001180163.1_Sparadoxus | cds-NP_010179.1_Sparadoxus | 88.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |