PYK2 (YOR347C)


Gene profile

Gene name: PYK2
Reference locus (S288C): YOR347C
Gene biotype: protein_coding

Description: Pyruvate kinase; appears to be modulated by phosphorylation; transcription repressed by glucose, and Pyk2p may be active under low glycolytic flux; PYK2 has a paralog, CDC19, that arose from the whole genome duplication

Top 10 interactors (score): PGI1 (0.997); MAE1 (0.997); ERR3 (0.995); ERR2 (0.995); ENO2 (0.994); ENO1 (0.994); TPI1 (0.99); ERR1 (0.985); FBA1 (0.985); GPM1 (0.979); CDC19 (0.978); PDC6 (0.976); ZWF1 (0.976); PDB1 (0.974); PYC1 (0.972); PDC1 (0.971); PGK1 (0.97); PDC5 (0.969); PDA1 (0.968); PFK1 (0.967)

Homologues (species, bitscore): PKLR (Homo sapiens, 498.4); Pklr (Mus musculus, 486.5); pkmb (Danio rerio, 471.9); pkm (Xenopus tropicalis, 489.2); PyK (Drosophila melanogaster, 478.8); pyk-2 (Caenorhabditis elegans, 478.8); AT5G08570 (Arabidopsis thaliana, 355.1)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:971519-973039:- gene-YOR347C_AKU4011 rna-NM_001183767.3_AKU4011 cds-NP_014992.3_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000078.1:8630-10150:- gene-YOR347C_BG1 rna-NM_001183767.3_BG1 cds-NP_014992.3_BG1 99.9 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:956362-957882:- gene-YOR347C_Bruggeman rna-NM_001183767.3_Bruggeman cds-NP_014992.3_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:956176-957696:- gene-YOR347C_CAT1 rna-NM_001183767.3_CAT1 cds-NP_014992.3_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:955931-957451:- gene-YOR347C_CBS1585 rna-NM_001183767.3_CBS1585 cds-NP_014992.3_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:950752-952272:- gene-YOR347C_CBS436 rna-NM_001183767.3_CBS436 cds-NP_014992.3_CBS436 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:185230-186750:- gene-YOR347C_CBS6412 rna-NM_001183767.3_CBS6412 cds-NP_014992.3_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:960201-961721:- gene-YOR347C_CBS6413 rna-NM_001183767.3_CBS6413 cds-NP_014992.3_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:984730-986250:- gene-YOR347C_CENPK1137D rna-NM_001183767.3_CENPK1137D cds-NP_014992.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:200227-201747:- gene-YOR347C_EthanolRed rna-NM_001183767.3_EthanolRed cds-NP_014992.3_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:953056-954576:- gene-YOR347C_FaliES1 rna-NM_001183767.3_FaliES1 cds-NP_014992.3_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000078.1:51083-52603:+ gene-YOR347C_JAY291 rna-NM_001183767.3_JAY291 cds-NP_014992.3_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:965674-967194:- gene-YOR347C_MUCL30387 rna-NM_001183767.3_MUCL30387 cds-NP_014992.3_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:973688-975208:- gene-YOR347C_MUCL30388 rna-NM_001183767.3_MUCL30388 cds-NP_014992.3_MUCL30388 99.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:962466-963986:- gene-YOR347C_MUCL39482 rna-NM_001183767.3_MUCL39482 cds-NP_014992.3_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:970076-971596:- gene-YOR347C_MUCL42920 rna-NM_001183767.3_MUCL42920 cds-NP_014992.3_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:984831-986351:- gene-YOR347C_NCIM3186 rna-NM_001183767.3_NCIM3186 cds-NP_014992.3_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:963475-964995:- gene-YOR347C_NCYC1407 rna-NM_001183767.3_NCYC1407 cds-NP_014992.3_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:958737-960257:- gene-YOR347C_PE2H3 rna-NM_001183767.3_PE2H3 cds-NP_014992.3_PE2H3 99.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:975089-976609:- gene-YOR347C_PE2H4 rna-NM_001183767.3_PE2H4 cds-NP_014992.3_PE2H4 99.9 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:984942-986462:- gene-YOR347C_S288C rna-NM_001183767.3_S288C cds-NP_014992.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000016.1:89393-90913:- gene-YOR347C_SA1 rna-NM_001183767.3_SA1 cds-NP_014992.3_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:952226-953746:- gene-YOR347C_ThermosaccDry rna-NM_001183767.3_ThermosaccDry cds-NP_014992.3_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:1013100-1015011:- gene-YOR347C_VR1 rna-NM_001183767.3_VR1 cds-NP_014992.3_VR1 79.1 100.0 Unannotated 1 1 0 False False False True False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:684960-686480:- gene-YOR347C_ZTW1 rna-NM_001183767.3_ZTW1 cds-NP_014992.3_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:958458-959978:- gene-YOR347C_Sparadoxus rna-NM_001183767.3_Sparadoxus cds-NP_014992.3_Sparadoxus 90.6 100.0 Verified 1 1 1 False True False False False

Additional files