Gene name: PXP2
Reference locus (S288C): YJR111C
Gene biotype: protein_coding
Description: Uncharacterized protein YJR111C; Peroxisomal matrix protein with naturally active promoter; well-conserved in fungi; localized to peroxisomes under physiological growth conditions; levels of some amino acids are altered upon both knockout and overexpression, suggesting potential involvement of Pxp2p in amino acid metabolism or related cellular metabolic processes (needs further study); GFP-fusion protein displays inherent dual localization with large proportion localizing to cytosol
Top 10 interactors (score): PBR1 (0.75); YLR352W (0.746); NIF3 (0.733); YOR338W (0.717); YLR118C (0.717); EMC10 (0.713); YMR087W (0.713); ANY1 (0.698); RTC6 (0.675); SUA5 (0.644); MEU1 (0.623); ADE13 (0.609); TMA108 (0.597); YML131W (0.568); CPA2 (0.56); DIA4 (0.528); BNA3 (0.528); SOD1 (0.526); HBN1 (0.523); TUM1 (0.523)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:607368-608219:- | gene-YJR111C_AKU4011 | rna-NM_001181769.1_AKU4011 | cds-NP_012645.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000076.1:65434-66285:+ | gene-YJR111C_BG1 | rna-NM_001181769.1_BG1 | cds-NP_012645.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:623095-623946:- | gene-YJR111C_Bruggeman | rna-NM_001181769.1_Bruggeman | cds-NP_012645.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:626850-627701:- | gene-YJR111C_CAT1 | rna-NM_001181769.1_CAT1 | cds-NP_012645.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:619422-620273:- | gene-YJR111C_CBS1585 | rna-NM_001181769.1_CBS1585 | cds-NP_012645.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:638293-639144:- | gene-YJR111C_CBS436 | rna-NM_001181769.1_CBS436 | cds-NP_012645.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:606226-607037:- | gene-YJR111C_CBS6412 | rna-NM_001181769.1_CBS6412 | cds-NP_012645.1_CBS6412 | 79.7 | 91.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:608842-609693:- | gene-YJR111C_CBS6413 | rna-NM_001181769.1_CBS6413 | cds-NP_012645.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:618173-619024:- | gene-YJR111C_CENPK1137D | rna-NM_001181769.1_CENPK1137D | cds-NP_012645.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:611786-612637:- | gene-YJR111C_EthanolRed | rna-NM_001181769.1_EthanolRed | cds-NP_012645.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:623252-624103:- | gene-YJR111C_FaliES1 | rna-NM_001181769.1_FaliES1 | cds-NP_012645.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:65042-65893:+ | gene-YJR111C_JAY291 | rna-NM_001181769.1_JAY291 | cds-NP_012645.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:621923-622774:- | gene-YJR111C_MUCL30387 | rna-NM_001181769.1_MUCL30387 | cds-NP_012645.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:619610-620461:- | gene-YJR111C_MUCL30388 | rna-NM_001181769.1_MUCL30388 | cds-NP_012645.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:612892-613743:- | gene-YJR111C_MUCL39482 | rna-NM_001181769.1_MUCL39482 | cds-NP_012645.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:617395-618246:- | gene-YJR111C_MUCL42920 | rna-NM_001181769.1_MUCL42920 | cds-NP_012645.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:635834-636685:- | gene-YJR111C_NCIM3186 | rna-NM_001181769.1_NCIM3186 | cds-NP_012645.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:610452-611303:- | gene-YJR111C_NCYC1407 | rna-NM_001181769.1_NCYC1407 | cds-NP_012645.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:628623-629474:- | gene-YJR111C_PE2H3 | rna-NM_001181769.1_PE2H3 | cds-NP_012645.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:622312-623163:- | gene-YJR111C_PE2H4 | rna-NM_001181769.1_PE2H4 | cds-NP_012645.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:635855-636706:- | gene-YJR111C_S288C | rna-NM_001181769.1_S288C | cds-NP_012645.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000038.1:94697-95548:- | gene-YJR111C_SA1 | rna-NM_001181769.1_SA1 | cds-NP_012645.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:617186-618037:- | gene-YJR111C_ThermosaccDry | rna-NM_001181769.1_ThermosaccDry | cds-NP_012645.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:619567-620418:- | gene-YJR111C_VR1 | rna-NM_001181769.1_VR1 | cds-NP_012645.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:596551-597402:- | gene-YJR111C_ZTW1 | rna-NM_001181769.1_ZTW1 | cds-NP_012645.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:630744-631595:- | gene-YJR111C_Sparadoxus | rna-NM_001181769.1_Sparadoxus | cds-NP_012645.1_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |