Gene name: PUT4
Reference locus (S288C): YOR348C
Gene biotype: protein_coding
Description: Yeast amino acid transporter; Proline permease; required for high-affinity transport of proline; also transports the toxic proline analog azetidine-2-carboxylate (AzC); PUT4 transcription is repressed in ammonia-grown cells
Top 10 interactors (score): TRP3 (0.907); PUT1 (0.906); UGA4 (0.893); PUT2 (0.882); DAL4 (0.861); MEP2 (0.822); GAD1 (0.796); SCT1 (0.78); DUR3 (0.753); DAL1 (0.748); UGA1 (0.713); DAL5 (0.712); AVT5 (0.701); MEP1 (0.692); CAR1 (0.69); DUR1,2 (0.658); LST4 (0.654); MEP3 (0.642); RSP5 (0.634); GLN3 (0.612)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:973476-975359:- | gene-YOR348C_AKU4011 | rna-NM_001183768.1_AKU4011 | cds-NP_014993.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000078.1:10587-12470:- | gene-YOR348C_BG1 | rna-NM_001183768.1_BG1 | cds-NP_014993.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:958297-960180:- | gene-YOR348C_Bruggeman | rna-NM_001183768.1_Bruggeman | cds-NP_014993.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:958132-960015:- | gene-YOR348C_CAT1 | rna-NM_001183768.1_CAT1 | cds-NP_014993.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:957888-959771:- | gene-YOR348C_CBS1585 | rna-NM_001183768.1_CBS1585 | cds-NP_014993.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:952709-954592:- | gene-YOR348C_CBS436 | rna-NM_001183768.1_CBS436 | cds-NP_014993.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:187187-189070:- | gene-YOR348C_CBS6412 | rna-NM_001183768.1_CBS6412 | cds-NP_014993.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:962158-964041:- | gene-YOR348C_CBS6413 | rna-NM_001183768.1_CBS6413 | cds-NP_014993.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:986687-988570:- | gene-YOR348C_CENPK1137D | rna-NM_001183768.1_CENPK1137D | cds-NP_014993.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:202184-204067:- | gene-YOR348C_EthanolRed | rna-NM_001183768.1_EthanolRed | cds-NP_014993.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:955013-956896:- | gene-YOR348C_FaliES1 | rna-NM_001183768.1_FaliES1 | cds-NP_014993.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000078.1:48763-50646:+ | gene-YOR348C_JAY291 | rna-NM_001183768.1_JAY291 | cds-NP_014993.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:967631-969514:- | gene-YOR348C_MUCL30387 | rna-NM_001183768.1_MUCL30387 | cds-NP_014993.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:975645-977528:- | gene-YOR348C_MUCL30388 | rna-NM_001183768.1_MUCL30388 | cds-NP_014993.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:964423-966306:- | gene-YOR348C_MUCL39482 | rna-NM_001183768.1_MUCL39482 | cds-NP_014993.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:972033-973916:- | gene-YOR348C_MUCL42920 | rna-NM_001183768.1_MUCL42920 | cds-NP_014993.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:986788-988671:- | gene-YOR348C_NCIM3186 | rna-NM_001183768.1_NCIM3186 | cds-NP_014993.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:965432-967315:- | gene-YOR348C_NCYC1407 | rna-NM_001183768.1_NCYC1407 | cds-NP_014993.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:960694-962577:- | gene-YOR348C_PE2H3 | rna-NM_001183768.1_PE2H3 | cds-NP_014993.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:977046-978929:- | gene-YOR348C_PE2H4 | rna-NM_001183768.1_PE2H4 | cds-NP_014993.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:986899-988782:- | gene-YOR348C_S288C | rna-NM_001183768.1_S288C | cds-NP_014993.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000016.1:91350-93233:- | gene-YOR348C_SA1 | rna-NM_001183768.1_SA1 | cds-NP_014993.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:954183-956066:- | gene-YOR348C_ThermosaccDry | rna-NM_001183768.1_ThermosaccDry | cds-NP_014993.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:1015448-1017331:- | gene-YOR348C_VR1 | rna-NM_001183768.1_VR1 | cds-NP_014993.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:686917-688800:- | gene-YOR348C_ZTW1 | rna-NM_001183768.1_ZTW1 | cds-NP_014993.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:960405-962294:- | gene-YOR348C_Sparadoxus | rna-NM_001183768.1_Sparadoxus | cds-NP_014993.1_Sparadoxus | 90.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |