Gene name: PUT3
Reference locus (S288C): YKL015W
Gene biotype: protein_coding
Description: Proline utilization trans-activator; Transcriptional activator; binds specific gene recruitment sequences and is required for DNA zip code-mediated targeting of genes to nuclear periphery; regulates proline utilization genes, constitutively binds PUT1 and PUT2 promoters as a dimer, undergoes conformational change to form active state; binds other promoters only under activating conditions; differentially phosphorylated in presence of different nitrogen sources; has a Zn(2)-Cys(6) binuclear cluster domain
Top 10 interactors (score): PUT2 (0.943); PUT1 (0.914); SPT10 (0.902); GAL4 (0.78); DAL80 (0.78); LEU3 (0.779); MCH5 (0.751); INO1 (0.75); GCN4 (0.71); NUP100 (0.693); LST7 (0.661); CAR1 (0.642); CBF1 (0.636); GRS1 (0.617); GLN3 (0.614); MSN4 (0.581); CHA4 (0.573); WAR1 (0.572); GRS2 (0.57); TSA2 (0.569)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:394562-397501:+ | gene-YKL015W_AKU4011 | rna-NM_001179581.1_AKU4011 | cds-NP_012910.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:246402-249341:- | gene-YKL015W_BG1 | rna-NM_001179581.1_BG1 | cds-NP_012910.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:416265-419204:+ | gene-YKL015W_Bruggeman | rna-NM_001179581.1_Bruggeman | cds-NP_012910.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:411372-414311:+ | gene-YKL015W_CAT1 | rna-NM_001179581.1_CAT1 | cds-NP_012910.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:407282-410221:+ | gene-YKL015W_CBS1585 | rna-NM_001179581.1_CBS1585 | cds-NP_012910.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:406143-409082:+ | gene-YKL015W_CBS436 | rna-NM_001179581.1_CBS436 | cds-NP_012910.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:391438-394377:+ | gene-YKL015W_CBS6412 | rna-NM_001179581.1_CBS6412 | cds-NP_012910.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:407137-410076:+ | gene-YKL015W_CBS6413 | rna-NM_001179581.1_CBS6413 | cds-NP_012910.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:408221-411160:+ | gene-YKL015W_CENPK1137D | rna-NM_001179581.1_CENPK1137D | cds-NP_012910.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:405059-407998:+ | gene-YKL015W_EthanolRed | rna-NM_001179581.1_EthanolRed | cds-NP_012910.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:407149-410088:+ | gene-YKL015W_FaliES1 | rna-NM_001179581.1_FaliES1 | cds-NP_012910.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000142.1:20963-23902:- | gene-YKL015W_JAY291 | rna-NM_001179581.1_JAY291 | cds-NP_012910.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:415580-418519:+ | gene-YKL015W_MUCL30387 | rna-NM_001179581.1_MUCL30387 | cds-NP_012910.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:411189-414128:+ | gene-YKL015W_MUCL30388 | rna-NM_001179581.1_MUCL30388 | cds-NP_012910.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:406599-409538:+ | gene-YKL015W_MUCL39482 | rna-NM_001179581.1_MUCL39482 | cds-NP_012910.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:412426-415365:+ | gene-YKL015W_MUCL42920 | rna-NM_001179581.1_MUCL42920 | cds-NP_012910.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:408533-411472:+ | gene-YKL015W_NCIM3186 | rna-NM_001179581.1_NCIM3186 | cds-NP_012910.1_NCIM3186 | 91.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:406791-409730:+ | gene-YKL015W_NCYC1407 | rna-NM_001179581.1_NCYC1407 | cds-NP_012910.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:431482-434421:+ | gene-YKL015W_PE2H3 | rna-NM_001179581.1_PE2H3 | cds-NP_012910.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:416224-419163:+ | gene-YKL015W_PE2H4 | rna-NM_001179581.1_PE2H4 | cds-NP_012910.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:408544-411483:+ | gene-YKL015W_S288C | rna-NM_001179581.1_S288C | cds-NP_012910.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000027.1:86824-89763:+ | gene-YKL015W_SA1 | rna-NM_001179581.1_SA1 | cds-NP_012910.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:407248-410187:+ | gene-YKL015W_ThermosaccDry | rna-NM_001179581.1_ThermosaccDry | cds-NP_012910.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:406502-409441:+ | gene-YKL015W_VR1 | rna-NM_001179581.1_VR1 | cds-NP_012910.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:405276-408215:+ | gene-YKL015W_ZTW1 | rna-NM_001179581.1_ZTW1 | cds-NP_012910.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:430258-433191:+ | gene-YKL015W_Sparadoxus | rna-NM_001179581.1_Sparadoxus | cds-NP_012910.1_Sparadoxus | 90.0 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |