Gene name: PUT1
Reference locus (S288C): YLR142W
Gene biotype: protein_coding
Description: Proline oxidase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; PUT1 transcription is induced by Put3p in the presence of proline and the absence of a preferred nitrogen source
Top 10 interactors (score): PUT2 (0.999); PRO3 (0.991); CAR1 (0.95); PRO1 (0.941); DUR3 (0.94); CAR2 (0.937); PRO2 (0.924); PUT3 (0.914); PUT4 (0.906); GLN1 (0.86); UGA2 (0.854); GDH2 (0.833); DUR1,2 (0.829); FMP32 (0.815); DAL80 (0.813); SPT10 (0.788); GAP1 (0.778); AIM17 (0.772); UGA1 (0.769); YGR127W (0.761)
Homologues (species, bitscore): POX2 (Homo sapiens, 87.8); Prodh (Mus musculus, 85.1); prodhb (Danio rerio, 81.3); prodh (Xenopus tropicalis, 84.3); slgA (Drosophila melanogaster, 77.0); B0513.5 (Caenorhabditis elegans, 84.0); ERD5 (Arabidopsis thaliana, 71.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:407664-409097:+ | gene-YLR142W_AKU4011 | rna-NM_001182029.1_AKU4011 | cds-NP_013243.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:371437-372867:+ | gene-YLR142W_BG1 | rna-NM_001182029.1_BG1 | cds-NP_013243.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:419559-420992:+ | gene-YLR142W_Bruggeman | rna-NM_001182029.1_Bruggeman | cds-NP_013243.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:418947-420377:+ | gene-YLR142W_CAT1 | rna-NM_001182029.1_CAT1 | cds-NP_013243.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:414807-416240:+ | gene-YLR142W_CBS1585 | rna-NM_001182029.1_CBS1585 | cds-NP_013243.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:405046-406476:+ | gene-YLR142W_CBS436 | rna-NM_001182029.1_CBS436 | cds-NP_013243.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:413225-414658:+ | gene-YLR142W_CBS6412 | rna-NM_001182029.1_CBS6412 | cds-NP_013243.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:415072-416505:+ | gene-YLR142W_CBS6413 | rna-NM_001182029.1_CBS6413 | cds-NP_013243.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:410206-411636:+ | gene-YLR142W_CENPK1137D | rna-NM_001182029.1_CENPK1137D | cds-NP_013243.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:407865-409298:+ | gene-YLR142W_EthanolRed | rna-NM_001182029.1_EthanolRed | cds-NP_013243.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:407376-408809:+ | gene-YLR142W_FaliES1 | rna-NM_001182029.1_FaliES1 | cds-NP_013243.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000061.1:14039-15469:+ | gene-YLR142W_JAY291 | rna-NM_001182029.1_JAY291 | cds-NP_013243.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:419563-420996:+ | gene-YLR142W_MUCL30387 | rna-NM_001182029.1_MUCL30387 | cds-NP_013243.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:424364-425797:+ | gene-YLR142W_MUCL30388 | rna-NM_001182029.1_MUCL30388 | cds-NP_013243.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:415316-416749:+ | gene-YLR142W_MUCL39482 | rna-NM_001182029.1_MUCL39482 | cds-NP_013243.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:415471-416901:+ | gene-YLR142W_MUCL42920 | rna-NM_001182029.1_MUCL42920 | cds-NP_013243.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:425160-426590:+ | gene-YLR142W_NCIM3186 | rna-NM_001182029.1_NCIM3186 | cds-NP_013243.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:407588-409021:+ | gene-YLR142W_NCYC1407 | rna-NM_001182029.1_NCYC1407 | cds-NP_013243.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:413147-414577:+ | gene-YLR142W_PE2H3 | rna-NM_001182029.1_PE2H3 | cds-NP_013243.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:412888-414318:+ | gene-YLR142W_PE2H4 | rna-NM_001182029.1_PE2H4 | cds-NP_013243.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:425186-426616:+ | gene-YLR142W_S288C | rna-NM_001182029.1_S288C | cds-NP_013243.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000055.1:51083-52513:+ | gene-YLR142W_SA1 | rna-NM_001182029.1_SA1 | cds-NP_013243.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:408586-410019:+ | gene-YLR142W_ThermosaccDry | rna-NM_001182029.1_ThermosaccDry | cds-NP_013243.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:421288-422718:+ | gene-YLR142W_VR1 | rna-NM_001182029.1_VR1 | cds-NP_013243.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:406372-407805:+ | gene-YLR142W_ZTW1 | rna-NM_001182029.1_ZTW1 | cds-NP_013243.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:416379-417812:+ | gene-YLR142W_Sparadoxus | rna-NM_001182029.1_Sparadoxus | cds-NP_013243.1_Sparadoxus | 90.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |