Gene name: PUL4
Reference locus (S288C): YNR063W
Gene biotype: protein_coding
Description: Uncharacterized transcriptional regulatory protein YNR063W; Putative zinc-cluster protein of unknown function
Top 10 interactors (score): YGR259C (0.944); YER134C (0.941); DOS2 (0.913); VBA5 (0.861); YOR292C (0.764); GAT4 (0.744); ROX1 (0.711); ERG20 (0.677); NTC20 (0.671); NHP6B (0.575); YLR278C (0.573); NPR3 (0.568); SKN1 (0.497); SUR1 (0.48); SMP1 (0.453); AVT5 (0.452); ECM22 (0.451); MRPL24 (0.45); IPT1 (0.45); HIS5 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:203379-205202:- | gene-YNR063W_AKU4011 | rna-NM_001183240.3_AKU4011 | cds-NP_014461.3_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:638514-640337:+ | gene-YNR063W_BG1 | rna-NM_001183240.3_BG1 | cds-NP_014461.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:748674-750497:+ | gene-YNR063W_Bruggeman | rna-NM_001183240.3_Bruggeman | cds-NP_014461.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:784311-786134:+ | gene-YNR063W_CAT1 | rna-NM_001183240.3_CAT1 | cds-NP_014461.3_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:735836-737659:+ | gene-YNR063W_CBS1585 | rna-NM_001183240.3_CBS1585 | cds-NP_014461.3_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:798688-800511:+ | gene-YNR063W_CBS436 | rna-NM_001183240.3_CBS436 | cds-NP_014461.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:724818-726641:+ | gene-YNR063W_CBS6412 | rna-NM_001183240.3_CBS6412 | cds-NP_014461.3_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:726499-728322:+ | gene-YNR063W_CBS6413 | rna-NM_001183240.3_CBS6413 | cds-NP_014461.3_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:740583-742406:+ | gene-YNR063W_CENPK1137D | rna-NM_001183240.3_CENPK1137D | cds-NP_014461.3_CENPK1137D | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:731476-733299:+ | gene-YNR063W_EthanolRed | rna-NM_001183240.3_EthanolRed | cds-NP_014461.3_EthanolRed | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:722668-724491:+ | gene-YNR063W_FaliES1 | rna-NM_001183240.3_FaliES1 | cds-NP_014461.3_FaliES1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000005.1:3250-5073:- | gene-YNR063W_JAY291 | rna-NM_001183240.3_JAY291 | cds-NP_014461.3_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:746633-748456:+ | gene-YNR063W_MUCL30387 | rna-NM_001183240.3_MUCL30387 | cds-NP_014461.3_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:788240-790063:+ | gene-YNR063W_MUCL30388 | rna-NM_001183240.3_MUCL30388 | cds-NP_014461.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:727302-729125:+ | gene-YNR063W_MUCL39482 | rna-NM_001183240.3_MUCL39482 | cds-NP_014461.3_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:733939-735762:+ | gene-YNR063W_MUCL42920 | rna-NM_001183240.3_MUCL42920 | cds-NP_014461.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:746912-748735:+ | gene-YNR063W_NCIM3186 | rna-NM_001183240.3_NCIM3186 | cds-NP_014461.3_NCIM3186 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:729818-731641:+ | gene-YNR063W_NCYC1407 | rna-NM_001183240.3_NCYC1407 | cds-NP_014461.3_NCYC1407 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:731363-733186:+ | gene-YNR063W_PE2H3 | rna-NM_001183240.3_PE2H3 | cds-NP_014461.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:732765-734588:+ | gene-YNR063W_PE2H4 | rna-NM_001183240.3_PE2H4 | cds-NP_014461.3_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:746943-748766:+ | gene-YNR063W_S288C | rna-NM_001183240.3_S288C | cds-NP_014461.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000087.1:23911-25734:- | gene-YNR063W_SA1 | rna-NM_001183240.3_SA1 | cds-NP_014461.3_SA1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:723011-724834:+ | gene-YNR063W_ThermosaccDry | rna-NM_001183240.3_ThermosaccDry | cds-NP_014461.3_ThermosaccDry | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:766251-768074:+ | gene-YNR063W_VR1 | rna-NM_001183240.3_VR1 | cds-NP_014461.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:632778-634601:+ | gene-YNR063W_ZTW1 | rna-NM_001183240.3_ZTW1 | cds-NP_014461.3_ZTW1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:736848-738671:+ | gene-YNR063W_Sparadoxus | rna-NM_001183240.3_Sparadoxus | cds-NP_014461.3_Sparadoxus | 91.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |