PUL3 (YNR062C)

Gene profile

Gene name: PUL3
Reference locus (S288C): YNR062C
Gene biotype: protein_coding

Description: Uncharacterized membrane protein ynr062c; Putative membrane protein of unknown function

Top 10 interactors (score): CHL4 (0.467); ARG5,6 (0.404)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:206809-207792:+ gene-YNR062C_AKU4011 rna-NM_001183239.3_AKU4011 cds-NP_014460.3_AKU4011 99.2 100.0 Verified 1 1 0 False False True False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000155.1:635931-636914:- gene-YNR062C_BG1 rna-NM_001183239.3_BG1 cds-NP_014460.3_BG1 99.7 100.0 Verified 1 1 0 False False True False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:746091-747074:- gene-YNR062C_Bruggeman rna-NM_001183239.3_Bruggeman cds-NP_014460.3_Bruggeman 99.7 100.0 Verified 1 1 0 False False True False False
CAT1 GCA_001738705.1 Bioethanol South America CM005532.1:781721-782704:- gene-YNR062C_CAT1 rna-NM_001183239.3_CAT1 cds-NP_014460.3_CAT1 99.4 100.0 Verified 1 1 0 False False True False False
CBS1585 GCA_001738375.1 Sake Asia CM005372.1:733246-734229:- gene-YNR062C_CBS1585 rna-NM_001183239.3_CBS1585 cds-NP_014460.3_CBS1585 99.1 100.0 Verified 1 1 0 False False True False False
CBS436 GCA_001738355.1 Sake Asia CM005356.1:796105-797088:- gene-YNR062C_CBS436 rna-NM_001183239.3_CBS436 cds-NP_014460.3_CBS436 99.7 100.0 Mismatch 1 1 0 False False True False False
CBS6412 GCA_001738345.1 Sake Asia CM005340.1:722228-723211:- gene-YNR062C_CBS6412 rna-NM_001183239.3_CBS6412 cds-NP_014460.3_CBS6412 99.1 100.0 Mismatch 1 1 0 False False True False False
CBS6413 GCA_001738265.1 Sake Asia CM005324.1:723909-724892:- gene-YNR062C_CBS6413 rna-NM_001183239.3_CBS6413 cds-NP_014460.3_CBS6413 99.1 100.0 Verified 1 1 0 False False True False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001535.1:737994-738977:- gene-YNR062C_CENPK1137D rna-NM_001183239.3_CENPK1137D cds-NP_014460.3_CENPK1137D 99.2 100.0 Verified 1 1 0 False False True False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005484.1:728886-729869:- gene-YNR062C_EthanolRed rna-NM_001183239.3_EthanolRed cds-NP_014460.3_EthanolRed 99.2 100.0 Verified 1 1 0 False False True False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005548.1:720078-721061:- gene-YNR062C_FaliES1 rna-NM_001183239.3_FaliES1 cds-NP_014460.3_FaliES1 99.2 100.0 Verified 1 1 0 False False True False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000005.1:6673-7656:+ gene-YNR062C_JAY291 rna-NM_001183239.3_JAY291 cds-NP_014460.3_JAY291 99.7 100.0 Verified 1 1 0 False False True False False
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:744050-745033:- gene-YNR062C_MUCL30387 rna-NM_001183239.3_MUCL30387 cds-NP_014460.3_MUCL30387 99.7 100.0 Verified 1 1 0 False False True False False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:785657-786640:- gene-YNR062C_MUCL30388 rna-NM_001183239.3_MUCL30388 cds-NP_014460.3_MUCL30388 99.7 100.0 Verified 1 1 0 False False True False False
MUCL39482 GCA_001738235.1 Sake Asia CM005292.1:724712-725695:- gene-YNR062C_MUCL39482 rna-NM_001183239.3_MUCL39482 cds-NP_014460.3_MUCL39482 99.1 100.0 Verified 1 1 0 False False True False False
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:731356-732339:- gene-YNR062C_MUCL42920 rna-NM_001183239.3_MUCL42920 cds-NP_014460.3_MUCL42920 99.3 100.0 Verified 1 1 0 False False True False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:744329-745312:- gene-YNR062C_NCIM3186 rna-NM_001183239.3_NCIM3186 cds-NP_014460.3_NCIM3186 98.8 100.0 Verified 1 1 0 False False True False False
NCYC1407 GCA_001738225.1 Sake Asia CM005276.1:727228-728211:- gene-YNR062C_NCYC1407 rna-NM_001183239.3_NCYC1407 cds-NP_014460.3_NCYC1407 99.1 100.0 Verified 1 1 0 False False True False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994153.1:728780-729763:- gene-YNR062C_PE2H3 rna-NM_001183239.3_PE2H3 cds-NP_014460.3_PE2H3 99.7 100.0 Verified 1 1 0 False False True False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999885.1:730182-731165:- gene-YNR062C_PE2H4 rna-NM_001183239.3_PE2H4 cds-NP_014460.3_PE2H4 99.7 100.0 Verified 1 1 0 False False True False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:744360-745343:- gene-YNR062C_S288C rna-NM_001183239.3_S288C cds-NP_014460.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000087.1:27341-28324:+ gene-YNR062C_SA1 rna-NM_001183239.3_SA1 cds-NP_014460.3_SA1 99.8 100.0 Verified 1 1 0 False False True False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005500.1:720421-721404:- gene-YNR062C_ThermosaccDry rna-NM_001183239.3_ThermosaccDry cds-NP_014460.3_ThermosaccDry 99.2 100.0 Verified 1 1 0 False False True False False
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:763668-764651:- gene-YNR062C_VR1 rna-NM_001183239.3_VR1 cds-NP_014460.3_VR1 99.7 100.0 Verified 1 1 0 False False True False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000030.1:630188-631171:- gene-YNR062C_ZTW1 rna-NM_001183239.3_ZTW1 cds-NP_014460.3_ZTW1 99.2 100.0 Verified 1 1 0 False False True False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047500.1:734265-735251:- gene-YNR062C_Sparadoxus rna-NM_001183239.3_Sparadoxus cds-NP_014460.3_Sparadoxus 90.3 100.0 Verified 1 1 0 False False True False False

Additional files