Gene name: PTR3
Reference locus (S288C): YFR029W
Gene biotype: protein_coding
Description: SPS-sensor component PTR3; Component of the SPS plasma membrane amino acid sensor system; senses external amino acid concentration and transmits intracellular signals that result in regulation of expression of amino acid permease genes; other members are Ssy1p, Ptr3p, and Ssy5p
Top 10 interactors (score): SSY1 (0.998); SSY5 (0.997); STP2 (0.949); STP1 (0.932); LEU2 (0.836); GAP1 (0.831); ASI2 (0.827); ASI3 (0.819); ASI1 (0.816); PTR2 (0.813); AGP1 (0.78); BAP2 (0.78); BAP3 (0.746); AVT5 (0.714); GNP1 (0.711); GRR1 (0.695); SHR3 (0.671); YCK1 (0.656); TAT1 (0.638); MEP2 (0.615)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005300.1:201086-203122:+ | gene-YFR029W_AKU4011 | rna-NM_001179994.1_AKU4011 | cds-NP_116685.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000071.1:57914-59950:- | gene-YFR029W_BG1 | rna-NM_001179994.1_BG1 | cds-NP_116685.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005508.1:204741-206777:+ | gene-YFR029W_Bruggeman | rna-NM_001179994.1_Bruggeman | cds-NP_116685.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005524.1:206725-208761:+ | gene-YFR029W_CAT1 | rna-NM_001179994.1_CAT1 | cds-NP_116685.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005364.1:202576-204612:+ | gene-YFR029W_CBS1585 | rna-NM_001179994.1_CBS1585 | cds-NP_116685.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005348.1:175547-177583:+ | gene-YFR029W_CBS436 | rna-NM_001179994.1_CBS436 | cds-NP_116685.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005332.1:201655-203691:+ | gene-YFR029W_CBS6412 | rna-NM_001179994.1_CBS6412 | cds-NP_116685.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005316.1:204313-206349:+ | gene-YFR029W_CBS6413 | rna-NM_001179994.1_CBS6413 | cds-NP_116685.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001527.1:207037-209073:+ | gene-YFR029W_CENPK1137D | rna-NM_001179994.1_CENPK1137D | cds-NP_116685.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005476.1:200192-202228:+ | gene-YFR029W_EthanolRed | rna-NM_001179994.1_EthanolRed | cds-NP_116685.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005540.1:201843-203879:+ | gene-YFR029W_FaliES1 | rna-NM_001179994.1_FaliES1 | cds-NP_116685.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000453.1:4983-7020:+ | gene-YFR029W_JAY291 | rna-NM_001179994.1_JAY291 | cds-NP_116685.1_JAY291 | 99.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005412.1:205176-207212:+ | gene-YFR029W_MUCL30387 | rna-NM_001179994.1_MUCL30387 | cds-NP_116685.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005444.1:200668-202704:+ | gene-YFR029W_MUCL30388 | rna-NM_001179994.1_MUCL30388 | cds-NP_116685.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005284.1:200496-202532:+ | gene-YFR029W_MUCL39482 | rna-NM_001179994.1_MUCL39482 | cds-NP_116685.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005428.1:199849-201885:+ | gene-YFR029W_MUCL42920 | rna-NM_001179994.1_MUCL42920 | cds-NP_116685.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011815.1:210936-212972:+ | gene-YFR029W_NCIM3186 | rna-NM_001179994.1_NCIM3186 | cds-NP_116685.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005268.1:201378-203414:+ | gene-YFR029W_NCYC1407 | rna-NM_001179994.1_NCYC1407 | cds-NP_116685.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994145.1:243391-245427:+ | gene-YFR029W_PE2H3 | rna-NM_001179994.1_PE2H3 | cds-NP_116685.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999877.1:242939-244975:+ | gene-YFR029W_PE2H4 | rna-NM_001179994.1_PE2H4 | cds-NP_116685.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001138.5:210937-212973:+ | gene-YFR029W_S288C | rna-NM_001179994.1_S288C | cds-NP_116685.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000011.1:111496-113532:- | gene-YFR029W_SA1 | rna-NM_001179994.1_SA1 | cds-NP_116685.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005492.1:201000-203036:+ | gene-YFR029W_ThermosaccDry | rna-NM_001179994.1_ThermosaccDry | cds-NP_116685.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005460.1:216763-218799:+ | gene-YFR029W_VR1 | rna-NM_001179994.1_VR1 | cds-NP_116685.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000013.1:131472-133508:+ | gene-YFR029W_ZTW1 | rna-NM_001179994.1_ZTW1 | cds-NP_116685.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047492.1:224631-226670:+ | gene-YFR029W_Sparadoxus | rna-NM_001179994.1_Sparadoxus | cds-NP_116685.1_Sparadoxus | 90.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |