Gene name: PTR2
Reference locus (S288C): YKR093W
Gene biotype: protein_coding
Description: Proton-dependent oligopeptide transporter, pot family; Integral membrane peptide transporter; mediates transport of di- and tri-peptides; conserved protein that contains 12 transmembrane domains; PTR2 expression is regulated by the N-end rule pathway via repression by Cup9p
Top 10 interactors (score): OPT1 (0.948); OPT2 (0.944); CUP9 (0.914); UPS1 (0.835); UBR1 (0.83); PTR3 (0.813); SSY1 (0.794); DAL5 (0.79); AGP1 (0.78); BAP2 (0.765); AAP1 (0.755); GAP1 (0.744); MEP3 (0.742); BAP3 (0.739); GNP1 (0.717); TNA1 (0.687); OXP1 (0.673); VRP1 (0.671); TAT1 (0.663); VBA2 (0.659)
Homologues (species, bitscore): SLC15A4 (Homo sapiens, 145.2); Slc15a4 (Mus musculus, 147.5); slc15a4 (Danio rerio, 142.5); slc15a4 (Xenopus tropicalis, 129.0); CG9444 (Drosophila melanogaster, 116.7); pept-3 (Caenorhabditis elegans, 110.2); PTR1 (Arabidopsis thaliana, 146.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:601669-603474:+ | gene-YKR093W_AKU4011 | rna-NM_001179883.1_AKU4011 | cds-NP_013019.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:40674-42479:- | gene-YKR093W_BG1 | rna-NM_001179883.1_BG1 | cds-NP_013019.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:624278-626083:+ | gene-YKR093W_Bruggeman | rna-NM_001179883.1_Bruggeman | cds-NP_013019.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:621589-623391:+ | gene-YKR093W_CAT1 | rna-NM_001179883.1_CAT1 | cds-NP_013019.1_CAT1 | 99.2 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:614156-615961:+ | gene-YKR093W_CBS1585 | rna-NM_001179883.1_CBS1585 | cds-NP_013019.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:612574-614372:+ | gene-YKR093W_CBS436 | rna-NM_001179883.1_CBS436 | cds-NP_013019.1_CBS436 | 98.7 | 99.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:597445-599250:+ | gene-YKR093W_CBS6412 | rna-NM_001179883.1_CBS6412 | cds-NP_013019.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:613975-615780:+ | gene-YKR093W_CBS6413 | rna-NM_001179883.1_CBS6413 | cds-NP_013019.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:615392-617197:+ | gene-YKR093W_CENPK1137D | rna-NM_001179883.1_CENPK1137D | cds-NP_013019.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:611557-613362:+ | gene-YKR093W_EthanolRed | rna-NM_001179883.1_EthanolRed | cds-NP_013019.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:615452-617257:+ | gene-YKR093W_FaliES1 | rna-NM_001179883.1_FaliES1 | cds-NP_013019.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000426.1:27715-29520:- | gene-YKR093W_JAY291 | rna-NM_001179883.1_JAY291 | cds-NP_013019.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:623798-625603:+ | gene-YKR093W_MUCL30387 | rna-NM_001179883.1_MUCL30387 | cds-NP_013019.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:618118-619923:+ | gene-YKR093W_MUCL30388 | rna-NM_001179883.1_MUCL30388 | cds-NP_013019.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:612997-614802:+ | gene-YKR093W_MUCL39482 | rna-NM_001179883.1_MUCL39482 | cds-NP_013019.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:619052-620857:+ | gene-YKR093W_MUCL42920 | rna-NM_001179883.1_MUCL42920 | cds-NP_013019.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:615719-617524:+ | gene-YKR093W_NCIM3186 | rna-NM_001179883.1_NCIM3186 | cds-NP_013019.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:613410-615215:+ | gene-YKR093W_NCYC1407 | rna-NM_001179883.1_NCYC1407 | cds-NP_013019.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:638653-640458:+ | gene-YKR093W_PE2H3 | rna-NM_001179883.1_PE2H3 | cds-NP_013019.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:623095-624900:+ | gene-YKR093W_PE2H4 | rna-NM_001179883.1_PE2H4 | cds-NP_013019.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:615730-617535:+ | gene-YKR093W_S288C | rna-NM_001179883.1_S288C | cds-NP_013019.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000029.1:64326-66131:- | gene-YKR093W_SA1 | rna-NM_001179883.1_SA1 | cds-NP_013019.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:614699-616504:+ | gene-YKR093W_ThermosaccDry | rna-NM_001179883.1_ThermosaccDry | cds-NP_013019.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:613962-615767:+ | gene-YKR093W_VR1 | rna-NM_001179883.1_VR1 | cds-NP_013019.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:611669-613474:+ | gene-YKR093W_ZTW1 | rna-NM_001179883.1_ZTW1 | cds-NP_013019.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:637034-638839:+ | gene-YKR093W_Sparadoxus | rna-NM_001179883.1_Sparadoxus | cds-NP_013019.1_Sparadoxus | 91.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |