Gene name: PTK1
Reference locus (S288C): YKL198C
Gene biotype: protein_coding
Description: Serine/threonine-protein kinase PTK1/STK1; Putative serine/threonine protein kinase; regulates spermine uptake; involved in polyamine transport; possible mitochondrial protein; PTK1 has a paralog, PTK2, that arose from the whole genome duplication
Top 10 interactors (score): SKG1 (0.824); YKL033W-A (0.813); YPR089W (0.748); YJL107C (0.747); PIR5 (0.746); TPH3 (0.744); TMA23 (0.711); PRM10 (0.71); EMC3 (0.701); ICS2 (0.699); PFF1 (0.693); GPI14 (0.69); MBF1 (0.688); SEA4 (0.675); TRM2 (0.669); STE23 (0.653); KSH1 (0.65); SKY1 (0.65); YJL127C-B (0.611); YIL156W-B (0.611)
Homologues (species, bitscore): TSSK6 (Homo sapiens, 94.0); Tssk6 (Mus musculus, 95.1); mark4a (Danio rerio, 92.0); mark2 (Xenopus tropicalis, 90.5); Sik2 (Drosophila melanogaster, 92.0); R02C2.6 (Caenorhabditis elegans, 98.6); SIP3 (Arabidopsis thaliana, 98.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:54597-56579:- | gene-YKL198C_AKU4011 | rna-NM_001179764.2_AKU4011 | cds-NP_012723.3_AKU4011 | 97.9 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:31550-33541:- | gene-YKL198C_BG1 | rna-NM_001179764.2_BG1 | cds-NP_012723.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:72250-74232:- | gene-YKL198C_Bruggeman | rna-NM_001179764.2_Bruggeman | cds-NP_012723.3_Bruggeman | 98.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:67416-69398:- | gene-YKL198C_CAT1 | rna-NM_001179764.2_CAT1 | cds-NP_012723.3_CAT1 | 99.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:66582-68564:- | gene-YKL198C_CBS1585 | rna-NM_001179764.2_CBS1585 | cds-NP_012723.3_CBS1585 | 98.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:65800-67791:- | gene-YKL198C_CBS436 | rna-NM_001179764.2_CBS436 | cds-NP_012723.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:51839-53821:- | gene-YKL198C_CBS6412 | rna-NM_001179764.2_CBS6412 | cds-NP_012723.3_CBS6412 | 98.0 | 99.5 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:67219-69201:- | gene-YKL198C_CBS6413 | rna-NM_001179764.2_CBS6413 | cds-NP_012723.3_CBS6413 | 98.1 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:68013-69995:- | gene-YKL198C_CENPK1137D | rna-NM_001179764.2_CENPK1137D | cds-NP_012723.3_CENPK1137D | 98.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:66029-68011:- | gene-YKL198C_EthanolRed | rna-NM_001179764.2_EthanolRed | cds-NP_012723.3_EthanolRed | 98.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:66088-68070:- | gene-YKL198C_FaliES1 | rna-NM_001179764.2_FaliES1 | cds-NP_012723.3_FaliES1 | 98.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000006.2:65633-67624:- | gene-YKL198C_JAY291 | rna-NM_001179764.2_JAY291 | cds-NP_012723.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:74781-76763:- | gene-YKL198C_MUCL30387 | rna-NM_001179764.2_MUCL30387 | cds-NP_012723.3_MUCL30387 | 98.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:68873-70855:- | gene-YKL198C_MUCL30388 | rna-NM_001179764.2_MUCL30388 | cds-NP_012723.3_MUCL30388 | 98.1 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:66639-68621:- | gene-YKL198C_MUCL39482 | rna-NM_001179764.2_MUCL39482 | cds-NP_012723.3_MUCL39482 | 98.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:70177-72159:- | gene-YKL198C_MUCL42920 | rna-NM_001179764.2_MUCL42920 | cds-NP_012723.3_MUCL42920 | 98.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:68221-70209:- | gene-YKL198C_NCIM3186 | rna-NM_001179764.2_NCIM3186 | cds-NP_012723.3_NCIM3186 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:66663-68645:- | gene-YKL198C_NCYC1407 | rna-NM_001179764.2_NCYC1407 | cds-NP_012723.3_NCYC1407 | 98.1 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:74173-76164:- | gene-YKL198C_PE2H3 | rna-NM_001179764.2_PE2H3 | cds-NP_012723.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:70467-72458:- | gene-YKL198C_PE2H4 | rna-NM_001179764.2_PE2H4 | cds-NP_012723.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:68232-70220:- | gene-YKL198C_S288C | rna-NM_001179764.2_S288C | cds-NP_012723.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000113.1:2102-4093:- | gene-YKL198C_SA1 | rna-NM_001179764.2_SA1 | cds-NP_012723.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:66836-68818:- | gene-YKL198C_ThermosaccDry | rna-NM_001179764.2_ThermosaccDry | cds-NP_012723.3_ThermosaccDry | 98.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:65879-67870:- | gene-YKL198C_VR1 | rna-NM_001179764.2_VR1 | cds-NP_012723.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:65757-67739:- | gene-YKL198C_ZTW1 | rna-NM_001179764.2_ZTW1 | cds-NP_012723.3_ZTW1 | 98.0 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:74427-76396:- | gene-YKL198C_Sparadoxus | rna-NM_001179764.2_Sparadoxus | cds-NP_012723.3_Sparadoxus | 87.1 | 98.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |