Gene name: PTH4
Reference locus (S288C): YOL114C
Gene biotype: protein_coding
Description: Putative uncharacterized protein YOL114C; Protein similar to the human peptidyl-tRNA hydrolase gene ICT1; associates with mitochondrial large subunit; may function in translation termination; YOL114C is not an essential gene
Top 10 interactors (score): MNP1 (0.997); MRPS16 (0.997); RML2 (0.996); RSM23 (0.995); MRPL28 (0.995); RRF1 (0.993); MRP7 (0.992); IMG1 (0.99); MRF1 (0.988); MRP20 (0.987); RTC6 (0.987); MRPL4 (0.985); MRPL19 (0.984); MRP17 (0.984); MRPL39 (0.984); MRPL9 (0.982); MRPS9 (0.981); MRPL17 (0.98); MRPL8 (0.979); MRPL27 (0.977)
Homologues (species, bitscore): ICT1 (Homo sapiens, 71.2); Ict1 (Mus musculus, 71.2); ICT1 (Danio rerio, 68.2); ict1 (Xenopus tropicalis, 68.2); CG6094 (Drosophila melanogaster, 67.0); R02F2.9 (Caenorhabditis elegans, 57.4); AT1G62850 (Arabidopsis thaliana, 69.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:91963-92571:- | gene-YOL114C_AKU4011 | rna-NM_001183368.1_AKU4011 | cds-NP_014527.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000172.1:57591-58199:- | gene-YOL114C_BG1 | rna-NM_001183368.1_BG1 | cds-NP_014527.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:93236-93844:- | gene-YOL114C_Bruggeman | rna-NM_001183368.1_Bruggeman | cds-NP_014527.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:92426-93034:- | gene-YOL114C_CAT1 | rna-NM_001183368.1_CAT1 | cds-NP_014527.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:86438-87046:- | gene-YOL114C_CBS1585 | rna-NM_001183368.1_CBS1585 | cds-NP_014527.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:92273-92881:- | gene-YOL114C_CBS436 | rna-NM_001183368.1_CBS436 | cds-NP_014527.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:86301-86909:- | gene-YOL114C_CBS6412 | rna-NM_001183368.1_CBS6412 | cds-NP_014527.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:92769-93377:- | gene-YOL114C_CBS6413 | rna-NM_001183368.1_CBS6413 | cds-NP_014527.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:103212-103820:- | gene-YOL114C_CENPK1137D | rna-NM_001183368.1_CENPK1137D | cds-NP_014527.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:90235-90843:- | gene-YOL114C_EthanolRed | rna-NM_001183368.1_EthanolRed | cds-NP_014527.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:92264-92872:- | gene-YOL114C_FaliES1 | rna-NM_001183368.1_FaliES1 | cds-NP_014527.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000203.1:9472-10080:- | gene-YOL114C_JAY291 | rna-NM_001183368.1_JAY291 | cds-NP_014527.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:97878-98486:- | gene-YOL114C_MUCL30387 | rna-NM_001183368.1_MUCL30387 | cds-NP_014527.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:100877-101485:- | gene-YOL114C_MUCL30388 | rna-NM_001183368.1_MUCL30388 | cds-NP_014527.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:94376-94984:- | gene-YOL114C_MUCL39482 | rna-NM_001183368.1_MUCL39482 | cds-NP_014527.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:110507-111115:- | gene-YOL114C_MUCL42920 | rna-NM_001183368.1_MUCL42920 | cds-NP_014527.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:103206-103814:- | gene-YOL114C_NCIM3186 | rna-NM_001183368.1_NCIM3186 | cds-NP_014527.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:100411-101019:- | gene-YOL114C_NCYC1407 | rna-NM_001183368.1_NCYC1407 | cds-NP_014527.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:78872-79480:- | gene-YOL114C_PE2H3 | rna-NM_001183368.1_PE2H3 | cds-NP_014527.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:95800-96408:- | gene-YOL114C_PE2H4 | rna-NM_001183368.1_PE2H4 | cds-NP_014527.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:103317-103925:- | gene-YOL114C_S288C | rna-NM_001183368.1_S288C | cds-NP_014527.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:76744-77352:- | gene-YOL114C_SA1 | rna-NM_001183368.1_SA1 | cds-NP_014527.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:91402-92010:- | gene-YOL114C_ThermosaccDry | rna-NM_001183368.1_ThermosaccDry | cds-NP_014527.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:92049-92657:- | gene-YOL114C_VR1 | rna-NM_001183368.1_VR1 | cds-NP_014527.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:91126-91734:- | gene-YOL114C_ZTW1 | rna-NM_001183368.1_ZTW1 | cds-NP_014527.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:93914-94522:- | gene-YOL114C_Sparadoxus | rna-NM_001183368.1_Sparadoxus | cds-NP_014527.1_Sparadoxus | 87.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |