Gene name: PTC7
Reference locus (S288C): YHR076W
Gene biotype: protein_coding
Description: Type 2C serine/threonine protein phosphatase (PP2C); alternatively spliced to create two mRNA isoforms; protein from spliced form localizes to the mitochondria while the one from the unspliced form is localized to the nuclear envelope; activates coenzyme Q6 biosynthesis by dephosphorylation of demethoxy-Q6 hydroxylase Coq7p
Top 10 interactors (score): PTC5 (0.987); PTC6 (0.973); PTC1 (0.9); PTC2 (0.898); PTC4 (0.878); PTC3 (0.866); CAT5 (0.85); SEC14 (0.781); TIM50 (0.744); KDX1 (0.702); UBC6 (0.694); ENV7 (0.689); HAS1 (0.68); PPT1 (0.671); LOS1 (0.66); SEC5 (0.647); PDA1 (0.636); PPQ1 (0.624); YCH1 (0.622); PPZ2 (0.619)
Homologues (species, bitscore): PPTC7 (Homo sapiens, 119.8); Pptc7 (Mus musculus, 120.2); pptc7a (Danio rerio, 117.1); pptc7 (Xenopus tropicalis, 120.2); CG15035 (Drosophila melanogaster, 113.2); W09D10.4 (Caenorhabditis elegans, 104.4); AT4G16580 (Arabidopsis thaliana, 97.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:237521-238645:+ | gene-YHR076W_AKU4011 | rna-NM_001179206.1_AKU4011 | cds-NP_011943.2_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:157868-158992:+ | gene-YHR076W_BG1 | rna-NM_001179206.1_BG1 | cds-NP_011943.2_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:245348-246472:+ | gene-YHR076W_Bruggeman | rna-NM_001179206.1_Bruggeman | cds-NP_011943.2_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:240242-241366:+ | gene-YHR076W_CAT1 | rna-NM_001179206.1_CAT1 | cds-NP_011943.2_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:236562-237686:+ | gene-YHR076W_CBS1585 | rna-NM_001179206.1_CBS1585 | cds-NP_011943.2_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:234421-235545:+ | gene-YHR076W_CBS436 | rna-NM_001179206.1_CBS436 | cds-NP_011943.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:239907-241031:+ | gene-YHR076W_CBS6412 | rna-NM_001179206.1_CBS6412 | cds-NP_011943.2_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:237602-238726:+ | gene-YHR076W_CBS6413 | rna-NM_001179206.1_CBS6413 | cds-NP_011943.2_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:244271-245395:+ | gene-YHR076W_CENPK1137D | rna-NM_001179206.1_CENPK1137D | cds-NP_011943.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:297119-298243:+ | gene-YHR076W_EthanolRed | rna-NM_001179206.1_EthanolRed | cds-NP_011943.2_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:237923-239047:+ | gene-YHR076W_FaliES1 | rna-NM_001179206.1_FaliES1 | cds-NP_011943.2_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000394.1:20663-21787:+ | gene-YHR076W_JAY291 | rna-NM_001179206.1_JAY291 | cds-NP_011943.2_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:244860-245984:+ | gene-YHR076W_MUCL30387 | rna-NM_001179206.1_MUCL30387 | cds-NP_011943.2_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:244726-245850:+ | gene-YHR076W_MUCL30388 | rna-NM_001179206.1_MUCL30388 | cds-NP_011943.2_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:236886-238010:+ | gene-YHR076W_MUCL39482 | rna-NM_001179206.1_MUCL39482 | cds-NP_011943.2_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:243625-244749:+ | gene-YHR076W_MUCL42920 | rna-NM_001179206.1_MUCL42920 | cds-NP_011943.2_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:250983-252107:+ | gene-YHR076W_NCIM3186 | rna-NM_001179206.1_NCIM3186 | cds-NP_011943.2_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:239350-240474:+ | gene-YHR076W_NCYC1407 | rna-NM_001179206.1_NCYC1407 | cds-NP_011943.2_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:239027-240151:+ | gene-YHR076W_PE2H3 | rna-NM_001179206.1_PE2H3 | cds-NP_011943.2_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:246474-247598:+ | gene-YHR076W_PE2H4 | rna-NM_001179206.1_PE2H4 | cds-NP_011943.2_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:251101-252225:+ | gene-YHR076W_S288C | rna-NM_001179206.1_S288C | cds-NP_011943.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:106758-107882:- | gene-YHR076W_SA1 | rna-NM_001179206.1_SA1 | cds-NP_011943.2_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:239014-240138:+ | gene-YHR076W_ThermosaccDry | rna-NM_001179206.1_ThermosaccDry | cds-NP_011943.2_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:246902-248026:+ | gene-YHR076W_VR1 | rna-NM_001179206.1_VR1 | cds-NP_011943.2_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:230565-231689:+ | gene-YHR076W_ZTW1 | rna-NM_001179206.1_ZTW1 | cds-NP_011943.2_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:236310-237434:+ | gene-YHR076W_Sparadoxus | rna-NM_001179206.1_Sparadoxus | cds-NP_011943.2_Sparadoxus | 90.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |