Gene name: PST1
Reference locus (S288C): YDR055W
Gene biotype: protein_coding
Description: Cell wall protein that contains a putative GPI-attachment site; secreted by regenerating protoplasts; up-regulated by activation of the cell integrity pathway, as mediated by Rlm1p; upregulated by cell wall damage via disruption of FKS1; PST1 has a paralog, ECM33, that arose from the whole genome duplication; Belongs to the SPS2 family
Top 10 interactors (score): PIR3 (0.91); GAS5 (0.799); SED1 (0.783); CRH1 (0.77); PPS1 (0.749); HSP150 (0.722); GAS1 (0.699); CCW14 (0.692); PIR1 (0.658); YJL132W (0.616); YPS3 (0.615); BGL2 (0.609); CWP1 (0.597); SAL1 (0.594); YGP1 (0.584); DIM1 (0.583); SCW4 (0.582); NCW2 (0.543); GDS1 (0.521); YJR061W (0.499)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:541071-542405:+ | gene-YDR055W_AKU4011 | rna-NM_001180363.1_AKU4011 | cds-NP_010340.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:12811-14145:- | gene-YDR055W_BG1 | rna-NM_001180363.1_BG1 | cds-NP_010340.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:573408-574742:+ | gene-YDR055W_Bruggeman | rna-NM_001180363.1_Bruggeman | cds-NP_010340.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:556408-557742:+ | gene-YDR055W_CAT1 | rna-NM_001180363.1_CAT1 | cds-NP_010340.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:532025-533359:+ | gene-YDR055W_CBS1585 | rna-NM_001180363.1_CBS1585 | cds-NP_010340.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:557190-558524:+ | gene-YDR055W_CBS436 | rna-NM_001180363.1_CBS436 | cds-NP_010340.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:528437-529771:+ | gene-YDR055W_CBS6412 | rna-NM_001180363.1_CBS6412 | cds-NP_010340.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:557106-558440:+ | gene-YDR055W_CBS6413 | rna-NM_001180363.1_CBS6413 | cds-NP_010340.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:562495-563829:+ | gene-YDR055W_CENPK1137D | rna-NM_001180363.1_CENPK1137D | cds-NP_010340.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:542895-544229:+ | gene-YDR055W_EthanolRed | rna-NM_001180363.1_EthanolRed | cds-NP_010340.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:549335-550669:+ | gene-YDR055W_FaliES1 | rna-NM_001180363.1_FaliES1 | cds-NP_010340.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000246.1:4046-5380:- | gene-YDR055W_JAY291 | rna-NM_001180363.1_JAY291 | cds-NP_010340.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:558071-559405:+ | gene-YDR055W_MUCL30387 | rna-NM_001180363.1_MUCL30387 | cds-NP_010340.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:548491-549825:+ | gene-YDR055W_MUCL30388 | rna-NM_001180363.1_MUCL30388 | cds-NP_010340.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:533396-534730:+ | gene-YDR055W_MUCL39482 | rna-NM_001180363.1_MUCL39482 | cds-NP_010340.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:463871-465205:+ | gene-YDR055W_MUCL42920 | rna-NM_001180363.1_MUCL42920 | cds-NP_010340.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:563450-564784:+ | gene-YDR055W_NCIM3186 | rna-NM_001180363.1_NCIM3186 | cds-NP_010340.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:532330-533664:+ | gene-YDR055W_NCYC1407 | rna-NM_001180363.1_NCYC1407 | cds-NP_010340.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:551966-553300:+ | gene-YDR055W_PE2H3 | rna-NM_001180363.1_PE2H3 | cds-NP_010340.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:551271-552605:+ | gene-YDR055W_PE2H4 | rna-NM_001180363.1_PE2H4 | cds-NP_010340.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:563527-564861:+ | gene-YDR055W_S288C | rna-NM_001180363.1_S288C | cds-NP_010340.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000011.1:80630-81964:- | gene-YDR055W_SA1 | rna-NM_001180363.1_SA1 | cds-NP_010340.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:549075-550409:+ | gene-YDR055W_ThermosaccDry | rna-NM_001180363.1_ThermosaccDry | cds-NP_010340.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:561780-563114:+ | gene-YDR055W_VR1 | rna-NM_001180363.1_VR1 | cds-NP_010340.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:546680-548014:+ | gene-YDR055W_ZTW1 | rna-NM_001180363.1_ZTW1 | cds-NP_010340.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:551087-552436:+ | gene-YDR055W_Sparadoxus | rna-NM_001180363.1_Sparadoxus | cds-NP_010340.1_Sparadoxus | 89.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |