Gene name: PSR2
Reference locus (S288C): YLR019W
Gene biotype: protein_coding
Description: Carboxy-terminal domain rna polymerase ii polypeptide a small phosphatase; Probable phosphatase PSR2; Plasma membrane phosphatase involved in the general stress response; required with Psr1p and Whi2p for full activation of STRE-mediated gene expression, possibly through dephosphorylation of Msn2p; PSR2 has a paralog, PSR1, that arose from the whole genome duplication
Top 10 interactors (score): WHI2 (0.947); PSR1 (0.764); MCK1 (0.746); MSN2 (0.702); PTC5 (0.681); MSN4 (0.678); FCP1 (0.651); PAR32 (0.617); PTP1 (0.559); RPA190 (0.55); PUF6 (0.525); GLC7 (0.496); SNF1 (0.494); SEC63 (0.481); RIF1 (0.478); TFG1 (0.459); MSN5 (0.457); TIM17 (0.455); YAK1 (0.45); HDA3 (0.45)
Homologues (species, bitscore): CTDSP2 (Homo sapiens, 220.7); Ctdspl (Mus musculus, 220.3); ctdsp2 (Danio rerio, 215.7); ctdsp2 (Xenopus tropicalis, 223.4); CG5830 (Drosophila melanogaster, 209.1); scpl-1 (Caenorhabditis elegans, 214.5); SSP5 (Arabidopsis thaliana, 163.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:168228-169421:+ | gene-YLR019W_AKU4011 | rna-NM_001181906.1_AKU4011 | cds-NP_013119.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:131498-132691:+ | gene-YLR019W_BG1 | rna-NM_001181906.1_BG1 | cds-NP_013119.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:178623-179816:+ | gene-YLR019W_Bruggeman | rna-NM_001181906.1_Bruggeman | cds-NP_013119.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:178945-180138:+ | gene-YLR019W_CAT1 | rna-NM_001181906.1_CAT1 | cds-NP_013119.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:175852-177045:+ | gene-YLR019W_CBS1585 | rna-NM_001181906.1_CBS1585 | cds-NP_013119.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:166485-167678:+ | gene-YLR019W_CBS436 | rna-NM_001181906.1_CBS436 | cds-NP_013119.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:174263-175456:+ | gene-YLR019W_CBS6412 | rna-NM_001181906.1_CBS6412 | cds-NP_013119.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:176115-177308:+ | gene-YLR019W_CBS6413 | rna-NM_001181906.1_CBS6413 | cds-NP_013119.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:165539-166732:+ | gene-YLR019W_CENPK1137D | rna-NM_001181906.1_CENPK1137D | cds-NP_013119.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:168240-169433:+ | gene-YLR019W_EthanolRed | rna-NM_001181906.1_EthanolRed | cds-NP_013119.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:167810-169003:+ | gene-YLR019W_FaliES1 | rna-NM_001181906.1_FaliES1 | cds-NP_013119.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000431.1:12003-13196:+ | gene-YLR019W_JAY291 | rna-NM_001181906.1_JAY291 | cds-NP_013119.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:175970-177163:+ | gene-YLR019W_MUCL30387 | rna-NM_001181906.1_MUCL30387 | cds-NP_013119.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:182593-183786:+ | gene-YLR019W_MUCL30388 | rna-NM_001181906.1_MUCL30388 | cds-NP_013119.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:176347-177540:+ | gene-YLR019W_MUCL39482 | rna-NM_001181906.1_MUCL39482 | cds-NP_013119.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:176249-177442:+ | gene-YLR019W_MUCL42920 | rna-NM_001181906.1_MUCL42920 | cds-NP_013119.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:180262-181455:+ | gene-YLR019W_NCIM3186 | rna-NM_001181906.1_NCIM3186 | cds-NP_013119.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:167967-169160:+ | gene-YLR019W_NCYC1407 | rna-NM_001181906.1_NCYC1407 | cds-NP_013119.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:174282-175475:+ | gene-YLR019W_PE2H3 | rna-NM_001181906.1_PE2H3 | cds-NP_013119.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:174023-175216:+ | gene-YLR019W_PE2H4 | rna-NM_001181906.1_PE2H4 | cds-NP_013119.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:180288-181481:+ | gene-YLR019W_S288C | rna-NM_001181906.1_S288C | cds-NP_013119.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000046.1:12138-13331:+ | gene-YLR019W_SA1 | rna-NM_001181906.1_SA1 | cds-NP_013119.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:168314-169507:+ | gene-YLR019W_ThermosaccDry | rna-NM_001181906.1_ThermosaccDry | cds-NP_013119.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:181732-182925:+ | gene-YLR019W_VR1 | rna-NM_001181906.1_VR1 | cds-NP_013119.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:167679-168872:+ | gene-YLR019W_ZTW1 | rna-NM_001181906.1_ZTW1 | cds-NP_013119.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:176479-177666:+ | gene-YLR019W_Sparadoxus | rna-NM_001181906.1_Sparadoxus | cds-NP_013119.1_Sparadoxus | 89.7 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |