Gene name: PSR1
Reference locus (S288C): YLL010C
Gene biotype: protein_coding
Description: Carboxy-terminal domain rna polymerase ii polypeptide a small phosphatase; Phosphatase PSR1; Plasma membrane associated protein phosphatase; involved in the general stress response; required along with binding partner Whi2p for full activation of STRE-mediated gene expression, possibly through dephosphorylation of Msn2p; PSR1 has a paralog, PSR2, that arose from the whole genome duplication
Top 10 interactors (score): WHI2 (0.997); FCP1 (0.809); SSN3 (0.805); MSN5 (0.787); PTC5 (0.782); BMH2 (0.78); PSR2 (0.764); MSN2 (0.758); MSN4 (0.737); SMP3 (0.701); MCK1 (0.582); PUS1 (0.564); GLC7 (0.552); PUF6 (0.525); YPL199C (0.524); SEC63 (0.51); ESL1 (0.505); VHS2 (0.495); YHR219W (0.489); PTC6 (0.469)
Homologues (species, bitscore): CTDSPL (Homo sapiens, 221.1); Ctdspl (Mus musculus, 221.1); ctdsplb (Danio rerio, 219.9); ctdspl (Xenopus tropicalis, 223.0); CG5830 (Drosophila melanogaster, 212.2); scpl-1 (Caenorhabditis elegans, 216.1); SSP5 (Arabidopsis thaliana, 168.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:117063-118364:- | gene-YLL010C_AKU4011 | rna-NM_001181830.1_AKU4011 | cds-NP_013091.1_AKU4011 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:80542-81813:- | gene-YLL010C_BG1 | rna-NM_001181830.1_BG1 | cds-NP_013091.1_BG1 | 98.8 | 99.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:127193-128473:- | gene-YLL010C_Bruggeman | rna-NM_001181830.1_Bruggeman | cds-NP_013091.1_Bruggeman | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:127740-129269:- | gene-YLL010C_CAT1 | rna-NM_001181830.1_CAT1 | cds-NP_013091.1_CAT1 | 83.2 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:124662-125963:- | gene-YLL010C_CBS1585 | rna-NM_001181830.1_CBS1585 | cds-NP_013091.1_CBS1585 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:115050-116321:- | gene-YLL010C_CBS436 | rna-NM_001181830.1_CBS436 | cds-NP_013091.1_CBS436 | 98.9 | 99.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:123425-124732:- | gene-YLL010C_CBS6412 | rna-NM_001181830.1_CBS6412 | cds-NP_013091.1_CBS6412 | 97.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:124923-126224:- | gene-YLL010C_CBS6413 | rna-NM_001181830.1_CBS6413 | cds-NP_013091.1_CBS6413 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:114387-115688:- | gene-YLL010C_CENPK1137D | rna-NM_001181830.1_CENPK1137D | cds-NP_013091.1_CENPK1137D | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:117105-118388:- | gene-YLL010C_EthanolRed | rna-NM_001181830.1_EthanolRed | cds-NP_013091.1_EthanolRed | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:116676-117959:- | gene-YLL010C_FaliES1 | rna-NM_001181830.1_FaliES1 | cds-NP_013091.1_FaliES1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000083.1:37419-38677:+ | gene-YLL010C_JAY291 | rna-NM_001181830.1_JAY291 | cds-NP_013091.1_JAY291 | 97.6 | 98.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:124785-126086:- | gene-YLL010C_MUCL30387 | rna-NM_001181830.1_MUCL30387 | cds-NP_013091.1_MUCL30387 | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:129017-130567:- | gene-YLL010C_MUCL30388 | rna-NM_001181830.1_MUCL30388 | cds-NP_013091.1_MUCL30388 | 82.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:125130-126431:- | gene-YLL010C_MUCL39482 | rna-NM_001181830.1_MUCL39482 | cds-NP_013091.1_MUCL39482 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:124823-126094:- | gene-YLL010C_MUCL42920 | rna-NM_001181830.1_MUCL42920 | cds-NP_013091.1_MUCL42920 | 98.7 | 99.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:129304-130587:- | gene-YLL010C_NCIM3186 | rna-NM_001181830.1_NCIM3186 | cds-NP_013091.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:116738-118039:- | gene-YLL010C_NCYC1407 | rna-NM_001181830.1_NCYC1407 | cds-NP_013091.1_NCYC1407 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:123105-124400:- | gene-YLL010C_PE2H3 | rna-NM_001181830.1_PE2H3 | cds-NP_013091.1_PE2H3 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:122846-124141:- | gene-YLL010C_PE2H4 | rna-NM_001181830.1_PE2H4 | cds-NP_013091.1_PE2H4 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:129330-130613:- | gene-YLL010C_S288C | rna-NM_001181830.1_S288C | cds-NP_013091.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000062.1:32291-33586:- | gene-YLL010C_SA1 | rna-NM_001181830.1_SA1 | cds-NP_013091.1_SA1 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:117179-118462:- | gene-YLL010C_ThermosaccDry | rna-NM_001181830.1_ThermosaccDry | cds-NP_013091.1_ThermosaccDry | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:130805-132064:- | gene-YLL010C_VR1 | rna-NM_001181830.1_VR1 | cds-NP_013091.1_VR1 | 97.8 | 98.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:116496-117797:- | gene-YLL010C_ZTW1 | rna-NM_001181830.1_ZTW1 | cds-NP_013091.1_ZTW1 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:124941-126185:- | gene-YLL010C_Sparadoxus | rna-NM_001181830.1_Sparadoxus | cds-NP_013091.1_Sparadoxus | 88.7 | 96.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |