Gene name: PSP1
Reference locus (S288C): YDR505C
Gene biotype: protein_coding
Description: Asn and gln rich protein of unknown function; high-copy suppressor of POL1 (DNA polymerase alpha) and partial suppressor of CDC2 (polymerase delta) and CDC6 (pre-RC loading factor) mutations; overexpression results in growth inhibition; PSP1 has a paralog, YLR177W, that arose from the whole genome duplication
Top 10 interactors (score): PSP2 (0.908); POL1 (0.836); RAD24 (0.807); YGL036W (0.761); OAZ1 (0.599); PAD1 (0.569); PMT7 (0.534); RBS1 (0.526); PUS4 (0.489); THP3 (0.485); RCK1 (0.472); VTS1 (0.451); MOT3 (0.449); CMR1 (0.434); SPE1 (0.425); NAB2 (0.4)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1396680-1399205:- | gene-YDR505C_AKU4011 | rna-NM_001180813.2_AKU4011 | cds-NP_010793.2_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000073.1:38274-40862:- | gene-YDR505C_BG1 | rna-NM_001180813.2_BG1 | cds-NP_010793.2_BG1 | 96.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1428001-1430526:- | gene-YDR505C_Bruggeman | rna-NM_001180813.2_Bruggeman | cds-NP_010793.2_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1405180-1407705:- | gene-YDR505C_CAT1 | rna-NM_001180813.2_CAT1 | cds-NP_010793.2_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1390922-1393447:- | gene-YDR505C_CBS1585 | rna-NM_001180813.2_CBS1585 | cds-NP_010793.2_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1410283-1412853:- | gene-YDR505C_CBS436 | rna-NM_001180813.2_CBS436 | cds-NP_010793.2_CBS436 | 97.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1386564-1389089:- | gene-YDR505C_CBS6412 | rna-NM_001180813.2_CBS6412 | cds-NP_010793.2_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1409579-1412104:- | gene-YDR505C_CBS6413 | rna-NM_001180813.2_CBS6413 | cds-NP_010793.2_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1455389-1457914:- | gene-YDR505C_CENPK1137D | rna-NM_001180813.2_CENPK1137D | cds-NP_010793.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1399969-1402494:- | gene-YDR505C_EthanolRed | rna-NM_001180813.2_EthanolRed | cds-NP_010793.2_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1403522-1406047:- | gene-YDR505C_FaliES1 | rna-NM_001180813.2_FaliES1 | cds-NP_010793.2_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:101808-104405:- | gene-YDR505C_JAY291 | rna-NM_001180813.2_JAY291 | cds-NP_010793.2_JAY291 | 96.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1410526-1413051:- | gene-YDR505C_MUCL30387 | rna-NM_001180813.2_MUCL30387 | cds-NP_010793.2_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1392519-1395044:- | gene-YDR505C_MUCL30388 | rna-NM_001180813.2_MUCL30388 | cds-NP_010793.2_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1382407-1384932:- | gene-YDR505C_MUCL39482 | rna-NM_001180813.2_MUCL39482 | cds-NP_010793.2_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1325205-1327775:- | gene-YDR505C_MUCL42920 | rna-NM_001180813.2_MUCL42920 | cds-NP_010793.2_MUCL42920 | 97.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1456618-1459143:- | gene-YDR505C_NCIM3186 | rna-NM_001180813.2_NCIM3186 | cds-NP_010793.2_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1396193-1398718:- | gene-YDR505C_NCYC1407 | rna-NM_001180813.2_NCYC1407 | cds-NP_010793.2_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1407075-1409672:- | gene-YDR505C_PE2H3 | rna-NM_001180813.2_PE2H3 | cds-NP_010793.2_PE2H3 | 96.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1412616-1415141:- | gene-YDR505C_PE2H4 | rna-NM_001180813.2_PE2H4 | cds-NP_010793.2_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1456695-1459220:- | gene-YDR505C_S288C | rna-NM_001180813.2_S288C | cds-NP_010793.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:157913-160438:+ | gene-YDR505C_SA1 | rna-NM_001180813.2_SA1 | cds-NP_010793.2_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1407744-1410269:- | gene-YDR505C_ThermosaccDry | rna-NM_001180813.2_ThermosaccDry | cds-NP_010793.2_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1423521-1426046:- | gene-YDR505C_VR1 | rna-NM_001180813.2_VR1 | cds-NP_010793.2_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:450412-452937:- | gene-YDR505C_ZTW1 | rna-NM_001180813.2_ZTW1 | cds-NP_010793.2_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1410620-1413121:- | gene-YDR505C_Sparadoxus | rna-NM_001180813.2_Sparadoxus | cds-NP_010793.2_Sparadoxus | 88.2 | 99.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |