Gene name: PSK1
Reference locus (S288C): YAL017W
Gene biotype: protein_coding
Description: Serine/threonine-protein kinase PSK1; PAS domain-containing serine/threonine protein kinase; coordinately regulates protein synthesis and carbohydrate metabolism and storage in response to a unknown metabolite that reflects nutritional status; PSK1 has a paralog, PSK2, that arose from the whole genome duplication
Top 10 interactors (score): UGP1 (0.915); TOR2 (0.815); BMH2 (0.794); SDS22 (0.765); PBP1 (0.753); GAL83 (0.747); ATS1 (0.703); SKO1 (0.696); LTE1 (0.667); GCN5 (0.665); GSY2 (0.653); YHL012W (0.63); TAF6 (0.62); PKP1 (0.609); SIP2 (0.608); SSN2 (0.598); GIP2 (0.594); VHC1 (0.592); CBF1 (0.588); SKN7 (0.582)
Homologues (species, bitscore): PASK (Homo sapiens, 192.6); Pask (Mus musculus, 211.1); pask (Danio rerio, 205.7); PASK (Xenopus tropicalis, 211.8); Pask (Drosophila melanogaster, 206.8); par-1 (Caenorhabditis elegans, 144.4); PPCK2 (Arabidopsis thaliana, 125.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:105336-109406:+ | gene-YAL017W_AKU4011 | rna-NM_001178162.2_AKU4011 | cds-NP_009385.2_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000070.1:92286-96356:+ | gene-YAL017W_BG1 | rna-NM_001178162.2_BG1 | cds-NP_009385.2_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:120209-124279:+ | gene-YAL017W_Bruggeman | rna-NM_001178162.2_Bruggeman | cds-NP_009385.2_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:106546-110616:+ | gene-YAL017W_CAT1 | rna-NM_001178162.2_CAT1 | cds-NP_009385.2_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:118353-122423:+ | gene-YAL017W_CBS1585 | rna-NM_001178162.2_CBS1585 | cds-NP_009385.2_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:118626-122696:+ | gene-YAL017W_CBS436 | rna-NM_001178162.2_CBS436 | cds-NP_009385.2_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:731442-735512:+ | gene-YAL017W_CBS6412 | rna-NM_001178162.2_CBS6412 | cds-NP_009385.2_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:116618-120688:+ | gene-YAL017W_CBS6413 | rna-NM_001178162.2_CBS6413 | cds-NP_009385.2_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:120383-124453:+ | gene-YAL017W_CENPK1137D | rna-NM_001178162.2_CENPK1137D | cds-NP_009385.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:106759-110829:+ | gene-YAL017W_EthanolRed | rna-NM_001178162.2_EthanolRed | cds-NP_009385.2_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:121383-125453:+ | gene-YAL017W_FaliES1 | rna-NM_001178162.2_FaliES1 | cds-NP_009385.2_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000084.1:92654-96724:+ | gene-YAL017W_JAY291 | rna-NM_001178162.2_JAY291 | cds-NP_009385.2_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:121336-125406:+ | gene-YAL017W_MUCL30387 | rna-NM_001178162.2_MUCL30387 | cds-NP_009385.2_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:117858-121928:+ | gene-YAL017W_MUCL30388 | rna-NM_001178162.2_MUCL30388 | cds-NP_009385.2_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:117137-121207:+ | gene-YAL017W_MUCL39482 | rna-NM_001178162.2_MUCL39482 | cds-NP_009385.2_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:119514-123584:+ | gene-YAL017W_MUCL42920 | rna-NM_001178162.2_MUCL42920 | cds-NP_009385.2_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:120102-124172:+ | gene-YAL017W_NCIM3186 | rna-NM_001178162.2_NCIM3186 | cds-NP_009385.2_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:105024-109094:+ | gene-YAL017W_NCYC1407 | rna-NM_001178162.2_NCYC1407 | cds-NP_009385.2_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:106942-111012:+ | gene-YAL017W_PE2H3 | rna-NM_001178162.2_PE2H3 | cds-NP_009385.2_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:106661-110731:+ | gene-YAL017W_PE2H4 | rna-NM_001178162.2_PE2H4 | cds-NP_009385.2_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:120225-124295:+ | gene-YAL017W_S288C | rna-NM_001178162.2_S288C | cds-NP_009385.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000077.1:37094-41164:+ | gene-YAL017W_SA1 | rna-NM_001178162.2_SA1 | cds-NP_009385.2_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:120896-124966:+ | gene-YAL017W_ThermosaccDry | rna-NM_001178162.2_ThermosaccDry | cds-NP_009385.2_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:122184-126254:+ | gene-YAL017W_VR1 | rna-NM_001178162.2_VR1 | cds-NP_009385.2_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:92704-96774:+ | gene-YAL017W_ZTW1 | rna-NM_001178162.2_ZTW1 | cds-NP_009385.2_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:110235-114305:+ | gene-YAL017W_Sparadoxus | rna-NM_001178162.2_Sparadoxus | cds-NP_009385.2_Sparadoxus | 90.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |