PSG1 (YKL077W)


Gene profile

Gene name: PSG1
Reference locus (S288C): YKL077W
Gene biotype: protein_coding

Description: Uncharacterized protein YKL077W; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole

Top 10 interactors (score): YDL121C (0.87); YIL067C (0.864); UIP5 (0.864); AST2 (0.779); YOR292C (0.77); YNL115C (0.766); GDT1 (0.744); PRM2 (0.699); AST1 (0.68); EPS1 (0.607); MNN9 (0.607); SFB3 (0.597); KEX2 (0.571); ERP4 (0.562); PRM1 (0.52); COP1 (0.517); DFR1 (0.482); PMA1 (0.48); TMN2 (0.48); SEC61 (0.442)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:278011-279189:+ gene-YKL077W_AKU4011 rna-NM_001179643.1_AKU4011 cds-NP_012846.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000113.1:365553-366731:- gene-YKL077W_BG1 rna-NM_001179643.1_BG1 cds-NP_012846.1_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:296176-297354:+ gene-YKL077W_Bruggeman rna-NM_001179643.1_Bruggeman cds-NP_012846.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:290981-292159:+ gene-YKL077W_CAT1 rna-NM_001179643.1_CAT1 cds-NP_012846.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:290252-291430:+ gene-YKL077W_CBS1585 rna-NM_001179643.1_CBS1585 cds-NP_012846.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005353.1:288845-290023:+ gene-YKL077W_CBS436 rna-NM_001179643.1_CBS436 cds-NP_012846.1_CBS436 99.9 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:274879-276057:+ gene-YKL077W_CBS6412 rna-NM_001179643.1_CBS6412 cds-NP_012846.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:290706-291884:+ gene-YKL077W_CBS6413 rna-NM_001179643.1_CBS6413 cds-NP_012846.1_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:291096-292274:+ gene-YKL077W_CENPK1137D rna-NM_001179643.1_CENPK1137D cds-NP_012846.1_CENPK1137D 99.9 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:288702-289880:+ gene-YKL077W_EthanolRed rna-NM_001179643.1_EthanolRed cds-NP_012846.1_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:289514-290692:+ gene-YKL077W_FaliES1 rna-NM_001179643.1_FaliES1 cds-NP_012846.1_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000357.1:111843-113021:+ gene-YKL077W_JAY291 rna-NM_001179643.1_JAY291 cds-NP_012846.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:297977-299155:+ gene-YKL077W_MUCL30387 rna-NM_001179643.1_MUCL30387 cds-NP_012846.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:292372-293550:+ gene-YKL077W_MUCL30388 rna-NM_001179643.1_MUCL30388 cds-NP_012846.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:290037-291215:+ gene-YKL077W_MUCL39482 rna-NM_001179643.1_MUCL39482 cds-NP_012846.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:294666-295844:+ gene-YKL077W_MUCL42920 rna-NM_001179643.1_MUCL42920 cds-NP_012846.1_MUCL42920 99.9 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:291442-292620:+ gene-YKL077W_NCIM3186 rna-NM_001179643.1_NCIM3186 cds-NP_012846.1_NCIM3186 92.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:290232-291410:+ gene-YKL077W_NCYC1407 rna-NM_001179643.1_NCYC1407 cds-NP_012846.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:297321-298499:+ gene-YKL077W_PE2H3 rna-NM_001179643.1_PE2H3 cds-NP_012846.1_PE2H3 99.9 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:293608-294786:+ gene-YKL077W_PE2H4 rna-NM_001179643.1_PE2H4 cds-NP_012846.1_PE2H4 99.9 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:291453-292631:+ gene-YKL077W_S288C rna-NM_001179643.1_S288C cds-NP_012846.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000008.1:207581-208759:+ gene-YKL077W_SA1 rna-NM_001179643.1_SA1 cds-NP_012846.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:290223-291401:+ gene-YKL077W_ThermosaccDry rna-NM_001179643.1_ThermosaccDry cds-NP_012846.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:289581-290759:+ gene-YKL077W_VR1 rna-NM_001179643.1_VR1 cds-NP_012846.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:288782-289960:+ gene-YKL077W_ZTW1 rna-NM_001179643.1_ZTW1 cds-NP_012846.1_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:305718-306896:+ gene-YKL077W_Sparadoxus rna-NM_001179643.1_Sparadoxus cds-NP_012846.1_Sparadoxus 88.5 99.7 Verified 1 1 1 False True False False False

Additional files