Gene name: PSE1
Reference locus (S288C): YMR308C
Gene biotype: protein_coding
Description: Importin subunit beta-3; Karyopherin/importin that interacts with the nuclear pore complex; acts as the nuclear import receptor for specific proteins, including Pdr1p, Yap1p, Ste12p, and Aft1p
Top 10 interactors (score): KAP95 (0.999); NUP53 (0.999); PHO4 (0.998); ULP1 (0.997); SRP1 (0.996); CSE1 (0.996); GSP1 (0.993); KAP104 (0.991); CRM1 (0.985); KAP114 (0.985); SXM1 (0.977); NMD5 (0.977); MSN5 (0.967); RLI1 (0.963); UTP10 (0.96); NUP116 (0.959); STE12 (0.958); NUP100 (0.957); KAP120 (0.952); RRP12 (0.951)
Homologues (species, bitscore): IPO5 (Homo sapiens, 464.5); Ipo5 (Mus musculus, 463.8); kpnb3 (Danio rerio, 470.3); ipo5 (Xenopus tropicalis, 470.3); Karybeta3 (Drosophila melanogaster, 504.6); imb-3 (Caenorhabditis elegans, 342.4); emb2734 (Arabidopsis thaliana, 447.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:928513-931782:- | gene-YMR308C_AKU4011 | rna-NM_001182819.1_AKU4011 | cds-NP_014039.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:22429-25698:+ | gene-YMR308C_BG1 | rna-NM_001182819.1_BG1 | cds-NP_014039.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:873925-877194:- | gene-YMR308C_Bruggeman | rna-NM_001182819.1_Bruggeman | cds-NP_014039.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:876487-879756:- | gene-YMR308C_CAT1 | rna-NM_001182819.1_CAT1 | cds-NP_014039.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:860766-864035:- | gene-YMR308C_CBS1585 | rna-NM_001182819.1_CBS1585 | cds-NP_014039.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:883058-886327:- | gene-YMR308C_CBS436 | rna-NM_001182819.1_CBS436 | cds-NP_014039.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:971486-974755:- | gene-YMR308C_CBS6412 | rna-NM_001182819.1_CBS6412 | cds-NP_014039.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:859886-863155:- | gene-YMR308C_CBS6413 | rna-NM_001182819.1_CBS6413 | cds-NP_014039.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:883513-886782:- | gene-YMR308C_CENPK1137D | rna-NM_001182819.1_CENPK1137D | cds-NP_014039.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:920512-923781:- | gene-YMR308C_EthanolRed | rna-NM_001182819.1_EthanolRed | cds-NP_014039.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:866753-870022:- | gene-YMR308C_FaliES1 | rna-NM_001182819.1_FaliES1 | cds-NP_014039.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000096.1:24979-28248:+ | gene-YMR308C_JAY291 | rna-NM_001182819.1_JAY291 | cds-NP_014039.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:867035-870304:- | gene-YMR308C_MUCL30387 | rna-NM_001182819.1_MUCL30387 | cds-NP_014039.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:876528-879797:- | gene-YMR308C_MUCL30388 | rna-NM_001182819.1_MUCL30388 | cds-NP_014039.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:861827-865096:- | gene-YMR308C_MUCL39482 | rna-NM_001182819.1_MUCL39482 | cds-NP_014039.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:870138-873407:- | gene-YMR308C_MUCL42920 | rna-NM_001182819.1_MUCL42920 | cds-NP_014039.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:888906-892175:- | gene-YMR308C_NCIM3186 | rna-NM_001182819.1_NCIM3186 | cds-NP_014039.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:861486-864755:- | gene-YMR308C_NCYC1407 | rna-NM_001182819.1_NCYC1407 | cds-NP_014039.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:876790-880059:- | gene-YMR308C_PE2H3 | rna-NM_001182819.1_PE2H3 | cds-NP_014039.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:872774-876043:- | gene-YMR308C_PE2H4 | rna-NM_001182819.1_PE2H4 | cds-NP_014039.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:888952-892221:- | gene-YMR308C_S288C | rna-NM_001182819.1_S288C | cds-NP_014039.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000036.1:66749-70018:- | gene-YMR308C_SA1 | rna-NM_001182819.1_SA1 | cds-NP_014039.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:862908-866177:- | gene-YMR308C_ThermosaccDry | rna-NM_001182819.1_ThermosaccDry | cds-NP_014039.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:876642-879911:- | gene-YMR308C_VR1 | rna-NM_001182819.1_VR1 | cds-NP_014039.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:278131-281400:- | gene-YMR308C_ZTW1 | rna-NM_001182819.1_ZTW1 | cds-NP_014039.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:881553-884822:- | gene-YMR308C_Sparadoxus | rna-NM_001182819.1_Sparadoxus | cds-NP_014039.1_Sparadoxus | 92.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |