Gene name: PRX1
Reference locus (S288C): YBL064C
Gene biotype: protein_coding
Description: Mitochondrial peroxiredoxin with thioredoxin peroxidase activity; has a role in reduction of hydroperoxides; reactivation requires Trr2p and glutathione; induced during respiratory growth and oxidative stress; phosphorylated; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): GTT1 (0.982); GLR1 (0.98); AHP1 (0.978); SEC4 (0.977); GRX2 (0.966); DUG1 (0.964); RBK1 (0.962); YPL225W (0.962); URE2 (0.948); CTT1 (0.944); TRX2 (0.943); GPX1 (0.942); HYR1 (0.939); SOD2 (0.933); ECM38 (0.932); TRR2 (0.931); TRX3 (0.924); YMR090W (0.923); TFS1 (0.923); DOT5 (0.923)
Homologues (species, bitscore): PRDX6 (Homo sapiens, 198.7); Prdx6 (Mus musculus, 203.0); prdx6 (Danio rerio, 203.8); prdx6 (Xenopus tropicalis, 200.7); Prx6005 (Drosophila melanogaster, 198.7); prdx-6 (Caenorhabditis elegans, 161.8); PER1 (Arabidopsis thaliana, 185.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:93950-94735:- | gene-YBL064C_AKU4011 | rna-NM_001178304.1_AKU4011 | cds-NP_009489.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:84808-85593:- | gene-YBL064C_BG1 | rna-NM_001178304.1_BG1 | cds-NP_009489.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:94565-95350:- | gene-YBL064C_Bruggeman | rna-NM_001178304.1_Bruggeman | cds-NP_009489.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:97203-97988:- | gene-YBL064C_CAT1 | rna-NM_001178304.1_CAT1 | cds-NP_009489.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:86517-87302:- | gene-YBL064C_CBS1585 | rna-NM_001178304.1_CBS1585 | cds-NP_009489.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:95025-95810:- | gene-YBL064C_CBS436 | rna-NM_001178304.1_CBS436 | cds-NP_009489.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:85023-85808:- | gene-YBL064C_CBS6412 | rna-NM_001178304.1_CBS6412 | cds-NP_009489.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:92095-92880:- | gene-YBL064C_CBS6413 | rna-NM_001178304.1_CBS6413 | cds-NP_009489.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:94128-94913:- | gene-YBL064C_CENPK1137D | rna-NM_001178304.1_CENPK1137D | cds-NP_009489.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:107949-108734:- | gene-YBL064C_EthanolRed | rna-NM_001178304.1_EthanolRed | cds-NP_009489.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:108802-109587:- | gene-YBL064C_FaliES1 | rna-NM_001178304.1_FaliES1 | cds-NP_009489.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000072.1:11423-12208:- | gene-YBL064C_JAY291 | rna-NM_001178304.1_JAY291 | cds-NP_009489.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:93939-94724:- | gene-YBL064C_MUCL30387 | rna-NM_001178304.1_MUCL30387 | cds-NP_009489.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:95217-96002:- | gene-YBL064C_MUCL30388 | rna-NM_001178304.1_MUCL30388 | cds-NP_009489.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:86698-87483:- | gene-YBL064C_MUCL39482 | rna-NM_001178304.1_MUCL39482 | cds-NP_009489.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:93534-94318:- | gene-YBL064C_MUCL42920 | rna-NM_001178304.1_MUCL42920 | cds-NP_009489.1_MUCL42920 | 99.7 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:100168-100953:- | gene-YBL064C_NCIM3186 | rna-NM_001178304.1_NCIM3186 | cds-NP_009489.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:87840-88625:- | gene-YBL064C_NCYC1407 | rna-NM_001178304.1_NCYC1407 | cds-NP_009489.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:94098-94883:- | gene-YBL064C_PE2H3 | rna-NM_001178304.1_PE2H3 | cds-NP_009489.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:91742-92527:- | gene-YBL064C_PE2H4 | rna-NM_001178304.1_PE2H4 | cds-NP_009489.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:100371-101156:- | gene-YBL064C_S288C | rna-NM_001178304.1_S288C | cds-NP_009489.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:84477-85262:- | gene-YBL064C_SA1 | rna-NM_001178304.1_SA1 | cds-NP_009489.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:108763-109548:- | gene-YBL064C_ThermosaccDry | rna-NM_001178304.1_ThermosaccDry | cds-NP_009489.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:90930-91715:- | gene-YBL064C_VR1 | rna-NM_001178304.1_VR1 | cds-NP_009489.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:85480-86265:- | gene-YBL064C_ZTW1 | rna-NM_001178304.1_ZTW1 | cds-NP_009489.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:120146-120931:- | gene-YBL064C_Sparadoxus | rna-NM_001178304.1_Sparadoxus | cds-NP_009489.1_Sparadoxus | 90.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |