Gene name: PRP31
Reference locus (S288C): YGR091W
Gene biotype: protein_coding
Description: Pre-mRNA-processing factor 31; Splicing factor; component of the U4/U6-U5 snRNP complex; Belongs to the PRP31 family
Top 10 interactors (score): PRP3 (0.999); LSM3 (0.999); SME1 (0.999); PRP11 (0.999); PRP4 (0.999); LSM6 (0.999); SMX2 (0.999); SMX3 (0.999); SNU13 (0.999); LSM8 (0.999); LSM2 (0.999); PRP8 (0.999); BRR2 (0.999); LSM5 (0.999); SMB1 (0.999); SMD3 (0.999); SNU66 (0.999); SMD2 (0.999); PRP6 (0.999); DIB1 (0.999)
Homologues (species, bitscore): PRPF31 (Homo sapiens, 172.2); Prpf31 (Mus musculus, 172.9); prpf31 (Danio rerio, 172.2); prpf31 (Xenopus tropicalis, 178.7); Prp31 (Drosophila melanogaster, 147.9); prp-31 (Caenorhabditis elegans, 153.7); emb1220 (Arabidopsis thaliana, 168.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:650523-652007:+ | gene-YGR091W_AKU4011 | rna-NM_001181220.1_AKU4011 | cds-NP_011605.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000173.1:86328-87812:+ | gene-YGR091W_BG1 | rna-NM_001181220.1_BG1 | cds-NP_011605.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:652711-654195:+ | gene-YGR091W_Bruggeman | rna-NM_001181220.1_Bruggeman | cds-NP_011605.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:650901-652385:+ | gene-YGR091W_CAT1 | rna-NM_001181220.1_CAT1 | cds-NP_011605.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:651487-652971:+ | gene-YGR091W_CBS1585 | rna-NM_001181220.1_CBS1585 | cds-NP_011605.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:653145-654629:+ | gene-YGR091W_CBS436 | rna-NM_001181220.1_CBS436 | cds-NP_011605.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:643180-644664:+ | gene-YGR091W_CBS6412 | rna-NM_001181220.1_CBS6412 | cds-NP_011605.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:648122-649606:+ | gene-YGR091W_CBS6413 | rna-NM_001181220.1_CBS6413 | cds-NP_011605.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:666018-667502:+ | gene-YGR091W_CENPK1137D | rna-NM_001181220.1_CENPK1137D | cds-NP_011605.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:638074-639558:+ | gene-YGR091W_EthanolRed | rna-NM_001181220.1_EthanolRed | cds-NP_011605.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:641919-643403:+ | gene-YGR091W_FaliES1 | rna-NM_001181220.1_FaliES1 | cds-NP_011605.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000396.1:33153-34637:- | gene-YGR091W_JAY291 | rna-NM_001181220.1_JAY291 | cds-NP_011605.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:649699-651183:+ | gene-YGR091W_MUCL30387 | rna-NM_001181220.1_MUCL30387 | cds-NP_011605.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:652511-653995:+ | gene-YGR091W_MUCL30388 | rna-NM_001181220.1_MUCL30388 | cds-NP_011605.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:647215-648699:+ | gene-YGR091W_MUCL39482 | rna-NM_001181220.1_MUCL39482 | cds-NP_011605.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:657523-659007:+ | gene-YGR091W_MUCL42920 | rna-NM_001181220.1_MUCL42920 | cds-NP_011605.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:666341-667825:+ | gene-YGR091W_NCIM3186 | rna-NM_001181220.1_NCIM3186 | cds-NP_011605.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:641904-643388:+ | gene-YGR091W_NCYC1407 | rna-NM_001181220.1_NCYC1407 | cds-NP_011605.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:644591-646075:+ | gene-YGR091W_PE2H3 | rna-NM_001181220.1_PE2H3 | cds-NP_011605.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:649711-651195:+ | gene-YGR091W_PE2H4 | rna-NM_001181220.1_PE2H4 | cds-NP_011605.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:666341-667825:+ | gene-YGR091W_S288C | rna-NM_001181220.1_S288C | cds-NP_011605.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:92915-94399:+ | gene-YGR091W_SA1 | rna-NM_001181220.1_SA1 | cds-NP_011605.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:662289-663773:+ | gene-YGR091W_ThermosaccDry | rna-NM_001181220.1_ThermosaccDry | cds-NP_011605.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:758781-760265:+ | gene-YGR091W_VR1 | rna-NM_001181220.1_VR1 | cds-NP_011605.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:116539-118023:+ | gene-YGR091W_ZTW1 | rna-NM_001181220.1_ZTW1 | cds-NP_011605.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:652299-653783:+ | gene-YGR091W_Sparadoxus | rna-NM_001181220.1_Sparadoxus | cds-NP_011605.1_Sparadoxus | 86.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |