PRM9 (YAR031W)


Gene profile

Gene name: PRM9
Reference locus (S288C): YAR031W
Gene biotype: protein_coding

Description: Pheromone-regulated protein; contains 3 predicted transmembrane segments and an FF sequence, a motif involved in COPII binding; member of DUP240 gene family; PRM9 has a paralog, PRM8, that arose from a segmental duplication

Top 10 interactors (score): YAR028W (0.854); UIP3 (0.772); SPG5 (0.749); MST28 (0.742); INA17 (0.694); YKL162C (0.694); YAR029W (0.633); ALO1 (0.617); URB1 (0.573); PHM6 (0.571); REX2 (0.571); SGD1 (0.563); FRT2 (0.561); SPO1 (0.497); GRX7 (0.451); AFG2 (0.451); COX13 (0.45)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005295.1:170557-170880:+ gene-YAR031W_AKU4011 rna-NM_001178224.1_AKU4011 cds-NP_009418.1_AKU4011 34.4 35.5 Unannotated 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000147.1:550-1404:- gene-YAR031W_BG1 rna-NM_001178224.1_BG1 cds-NP_009418.1_BG1 88.3 95.2 Unannotated 1 1 0 False False True False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005503.1:183544-184414:+ gene-YAR031W_Bruggeman rna-NM_001178224.1_Bruggeman cds-NP_009418.1_Bruggeman 89.8 96.8 Unannotated 1 1 0 False False False True False
CAT1 GCA_001738705.1 Bioethanol South America CM005519.1:173622-174493:+ gene-YAR031W_CAT1 rna-NM_001178224.1_CAT1 cds-NP_009418.1_CAT1 89.8 96.9 Unannotated 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia MBVS01000058.1:81-404:- gene-YAR031W_CBS1585 rna-NM_001178224.1_CBS1585 cds-NP_009418.1_CBS1585 34.4 35.5 Unannotated 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005343.1:179357-180228:+ gene-YAR031W_CBS436 rna-NM_001178224.1_CBS436 cds-NP_009418.1_CBS436 89.9 96.9 Unannotated 1 1 0 False False False True False
CBS6412 GCA_001738345.1 Sake Asia CM005327.1:216539-216857:+ gene-YAR031W_CBS6412 rna-NM_001178224.1_CBS6412 cds-NP_009418.1_CBS6412 35.4 35.5 Mismatch 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001522.1:186747-187653:+ gene-YAR031W_CENPK1137D rna-NM_001178224.1_CENPK1137D cds-NP_009418.1_CENPK1137D 98.8 100.0 Unannotated 1 1 0 False False False True False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005471.1:167682-168578:+ gene-YAR031W_EthanolRed rna-NM_001178224.1_EthanolRed cds-NP_009418.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia MBWD01000095.1:592-1408:- gene-YAR031W_FaliES1 rna-NM_001178224.1_FaliES1 cds-NP_009418.1_FaliES1 91.0 91.0 Verified 1 1 0 False False True False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000425.1:1-659:+ gene-YAR031W_JAY291 rna-NM_001178224.1_JAY291 cds-NP_009418.1_JAY291 67.4 73.4 Verified 1 1 0 False False True False False
MUCL30387 GCA_001738515.1 Bread Europe CM005407.1:186128-187024:+ gene-YAR031W_MUCL30387 rna-NM_001178224.1_MUCL30387 cds-NP_009418.1_MUCL30387 63.9 100.0 Verified 1 1 0 False False False True False
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000289.1:309-1205:- gene-YAR031W_MUCL30388 rna-NM_001178224.1_MUCL30388 cds-NP_009418.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000283.1:225-1121:- gene-YAR031W_MUCL42920 rna-NM_001178224.1_MUCL42920 cds-NP_009418.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011810.1:186713-187609:+ gene-YAR031W_NCIM3186 rna-NM_001178224.1_NCIM3186 cds-NP_009418.1_NCIM3186 98.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia MBVM01000061.1:1-664:- gene-YAR031W_NCYC1407 rna-NM_001178224.1_NCYC1407 cds-NP_009418.1_NCYC1407 63.1 72.3 Verified 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994140.1:174221-175092:+ gene-YAR031W_PE2H3 rna-NM_001178224.1_PE2H3 cds-NP_009418.1_PE2H3 89.8 96.9 Unannotated 1 1 0 False False False True False
PE2H4 GCA_905220315.1 Bioethanol South America LR999872.1:173940-174811:+ gene-YAR031W_PE2H4 rna-NM_001178224.1_PE2H4 cds-NP_009418.1_PE2H4 89.8 96.9 Unannotated 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001133.9:186836-187732:+ gene-YAR031W_S288C rna-NM_001178224.1_S288C cds-NP_009418.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000130.1:5534-6405:+ gene-YAR031W_SA1 rna-NM_001178224.1_SA1 cds-NP_009418.1_SA1 89.8 96.9 Unannotated 1 1 0 False False False True False
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000095.1:592-1408:- gene-YAR031W_ThermosaccDry rna-NM_001178224.1_ThermosaccDry cds-NP_009418.1_ThermosaccDry 91.0 91.0 Verified 1 1 0 False False True False False
VR1 GCA_001738595.1 Bioethanol South America CM005455.1:190702-191573:+ gene-YAR031W_VR1 rna-NM_001178224.1_VR1 cds-NP_009418.1_VR1 89.8 96.9 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047487.1:176606-177523:+ gene-YAR031W_Sparadoxus rna-NM_001178224.1_Sparadoxus cds-NP_009418.1_Sparadoxus 69.3 96.7 Unannotated 1 1 0 False False True False False

Additional files