Gene name: PRM6
Reference locus (S288C): YML047C
Gene biotype: protein_coding
Description: Pheromone-regulated membrane protein 6; Potassium transporter that mediates K+ influx; activates high-affinity Ca2+ influx system (HACS) during mating pheromone response; expression up-regulated in response to alpha factor; regulated by Ste12p during mating; localized to sites of polarized growth; member of a fungal-specific gene family; PRM6 has a paralog, KCH1, that arose from the whole genome duplication; To yeast YJR054w
Top 10 interactors (score): FIG1 (0.933); TRK2 (0.905); TRK1 (0.891); DFG10 (0.855); ALG6 (0.711); YOL162W (0.699); YOL163W (0.698); COS12 (0.691); JLP1 (0.672); ERS1 (0.619); FRE4 (0.611); MNN5 (0.598); SPS100 (0.563); KCH1 (0.49); YKL070W (0.454); MTC4 (0.45); AGA1 (0.429); PRM2 (0.416)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:173438-174496:- | gene-YML047C_AKU4011 | rna-NM_001182404.1_AKU4011 | cds-NP_013666.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:301362-302420:+ | gene-YML047C_BG1 | rna-NM_001182404.1_BG1 | cds-NP_013666.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:179506-180564:- | gene-YML047C_Bruggeman | rna-NM_001182404.1_Bruggeman | cds-NP_013666.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:183052-184110:- | gene-YML047C_CAT1 | rna-NM_001182404.1_CAT1 | cds-NP_013666.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:174199-175257:- | gene-YML047C_CBS1585 | rna-NM_001182404.1_CBS1585 | cds-NP_013666.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:179323-180381:- | gene-YML047C_CBS436 | rna-NM_001182404.1_CBS436 | cds-NP_013666.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:287998-289056:- | gene-YML047C_CBS6412 | rna-NM_001182404.1_CBS6412 | cds-NP_013666.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:173511-174569:- | gene-YML047C_CBS6413 | rna-NM_001182404.1_CBS6413 | cds-NP_013666.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:186219-187277:- | gene-YML047C_CENPK1137D | rna-NM_001182404.1_CENPK1137D | cds-NP_013666.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:174264-175322:- | gene-YML047C_EthanolRed | rna-NM_001182404.1_EthanolRed | cds-NP_013666.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:174795-175853:- | gene-YML047C_FaliES1 | rna-NM_001182404.1_FaliES1 | cds-NP_013666.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000172.1:2938-3996:+ | gene-YML047C_JAY291 | rna-NM_001182404.1_JAY291 | cds-NP_013666.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:178034-179092:- | gene-YML047C_MUCL30387 | rna-NM_001182404.1_MUCL30387 | cds-NP_013666.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:182119-183177:- | gene-YML047C_MUCL30388 | rna-NM_001182404.1_MUCL30388 | cds-NP_013666.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:174545-175603:- | gene-YML047C_MUCL39482 | rna-NM_001182404.1_MUCL39482 | cds-NP_013666.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:179337-180395:- | gene-YML047C_MUCL42920 | rna-NM_001182404.1_MUCL42920 | cds-NP_013666.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:179971-181029:- | gene-YML047C_NCIM3186 | rna-NM_001182404.1_NCIM3186 | cds-NP_013666.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:174507-175565:- | gene-YML047C_NCYC1407 | rna-NM_001182404.1_NCYC1407 | cds-NP_013666.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:180008-181066:- | gene-YML047C_PE2H3 | rna-NM_001182404.1_PE2H3 | cds-NP_013666.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:180174-181232:- | gene-YML047C_PE2H4 | rna-NM_001182404.1_PE2H4 | cds-NP_013666.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:180017-181075:- | gene-YML047C_S288C | rna-NM_001182404.1_S288C | cds-NP_013666.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000041.1:3045-4103:+ | gene-YML047C_SA1 | rna-NM_001182404.1_SA1 | cds-NP_013666.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:174311-175369:- | gene-YML047C_ThermosaccDry | rna-NM_001182404.1_ThermosaccDry | cds-NP_013666.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:177799-178857:- | gene-YML047C_VR1 | rna-NM_001182404.1_VR1 | cds-NP_013666.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:153384-154442:- | gene-YML047C_ZTW1 | rna-NM_001182404.1_ZTW1 | cds-NP_013666.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:184951-186009:- | gene-YML047C_Sparadoxus | rna-NM_001182404.1_Sparadoxus | cds-NP_013666.1_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |