Gene name: PRM15
Reference locus (S288C): YMR278W
Gene biotype: protein_coding
Description: Phosphoribomutase; catalyzes interconversion of ribose-1-phosphate and ribose-5-phosphate; has some phosphoglucomutase activity but primary activity in vivo is phosphoribomutase; contributes to ribose recycling in the pentose phosphate pathway; transcription induced in response to stress; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; non-essential
Top 10 interactors (score): PGM1 (0.995); PGM2 (0.992); ADH4 (0.988); PGI1 (0.985); ADE12 (0.979); YHL012W (0.973); UGP1 (0.973); YJL068C (0.972); RBK1 (0.969); RKI1 (0.968); APE4 (0.963); COF1 (0.963); TKL2 (0.955); GPH1 (0.955); TKL1 (0.954); YSA1 (0.949); GDB1 (0.913); TAL1 (0.911); YMR099C (0.909); PCM1 (0.899)
Homologues (species, bitscore): PGM2 (Homo sapiens, 398.7); Pgm1 (Mus musculus, 395.6); pgm2 (Danio rerio, 403.3); pgm2l1 (Xenopus tropicalis, 327.4); Pmm45A (Drosophila melanogaster, 414.8); Y43F4B.5 (Caenorhabditis elegans, 359.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:861827-863695:+ | gene-YMR278W_AKU4011 | rna-NM_001182785.1_AKU4011 | cds-NP_014005.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:89990-91858:- | gene-YMR278W_BG1 | rna-NM_001182785.1_BG1 | cds-NP_014005.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:807036-808904:+ | gene-YMR278W_Bruggeman | rna-NM_001182785.1_Bruggeman | cds-NP_014005.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:810322-812190:+ | gene-YMR278W_CAT1 | rna-NM_001182785.1_CAT1 | cds-NP_014005.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:794077-795945:+ | gene-YMR278W_CBS1585 | rna-NM_001182785.1_CBS1585 | cds-NP_014005.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:816380-818248:+ | gene-YMR278W_CBS436 | rna-NM_001182785.1_CBS436 | cds-NP_014005.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:905651-907519:+ | gene-YMR278W_CBS6412 | rna-NM_001182785.1_CBS6412 | cds-NP_014005.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:793198-795066:+ | gene-YMR278W_CBS6413 | rna-NM_001182785.1_CBS6413 | cds-NP_014005.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:817321-819189:+ | gene-YMR278W_CENPK1137D | rna-NM_001182785.1_CENPK1137D | cds-NP_014005.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:854516-856384:+ | gene-YMR278W_EthanolRed | rna-NM_001182785.1_EthanolRed | cds-NP_014005.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:800543-802411:+ | gene-YMR278W_FaliES1 | rna-NM_001182785.1_FaliES1 | cds-NP_014005.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000262.1:49336-51204:- | gene-YMR278W_JAY291 | rna-NM_001182785.1_JAY291 | cds-NP_014005.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:800861-802729:+ | gene-YMR278W_MUCL30387 | rna-NM_001182785.1_MUCL30387 | cds-NP_014005.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:810258-812126:+ | gene-YMR278W_MUCL30388 | rna-NM_001182785.1_MUCL30388 | cds-NP_014005.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:795165-797033:+ | gene-YMR278W_MUCL39482 | rna-NM_001182785.1_MUCL39482 | cds-NP_014005.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:803232-805100:+ | gene-YMR278W_MUCL42920 | rna-NM_001182785.1_MUCL42920 | cds-NP_014005.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:822717-824585:+ | gene-YMR278W_NCIM3186 | rna-NM_001182785.1_NCIM3186 | cds-NP_014005.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:794808-796676:+ | gene-YMR278W_NCYC1407 | rna-NM_001182785.1_NCYC1407 | cds-NP_014005.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:810598-812466:+ | gene-YMR278W_PE2H3 | rna-NM_001182785.1_PE2H3 | cds-NP_014005.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:806575-808443:+ | gene-YMR278W_PE2H4 | rna-NM_001182785.1_PE2H4 | cds-NP_014005.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:822763-824631:+ | gene-YMR278W_S288C | rna-NM_001182785.1_S288C | cds-NP_014005.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000036.1:187-2055:+ | gene-YMR278W_SA1 | rna-NM_001182785.1_SA1 | cds-NP_014005.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:796712-798580:+ | gene-YMR278W_ThermosaccDry | rna-NM_001182785.1_ThermosaccDry | cds-NP_014005.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:809948-811816:+ | gene-YMR278W_VR1 | rna-NM_001182785.1_VR1 | cds-NP_014005.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:211946-213814:+ | gene-YMR278W_ZTW1 | rna-NM_001182785.1_ZTW1 | cds-NP_014005.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:815149-817017:+ | gene-YMR278W_Sparadoxus | rna-NM_001182785.1_Sparadoxus | cds-NP_014005.1_Sparadoxus | 90.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |