Gene name: PRI2
Reference locus (S288C): YKL045W
Gene biotype: protein_coding
Description: Subunit of DNA primase; DNA primase is required for DNA synthesis and double-strand break repair; Belongs to the eukaryotic-type primase large subunit family
Top 10 interactors (score): CDC45 (0.999); POL1 (0.999); DPB2 (0.999); POL2 (0.999); PRI1 (0.999); POL31 (0.999); POL3 (0.999); POL12 (0.999); RFA1 (0.998); MCM2 (0.998); RFA2 (0.998); MCM7 (0.995); MCM4 (0.995); RAD27 (0.995); CDC6 (0.994); ORC5 (0.994); RFC5 (0.994); ORC4 (0.994); MCM5 (0.993); MCM3 (0.993)
Homologues (species, bitscore): PRIM2 (Homo sapiens, 284.3); Prim2 (Mus musculus, 290.8); PRIM2 (Danio rerio, 291.2); prim2 (Xenopus tropicalis, 291.2); S(faf)240 (Drosophila melanogaster, 233.8); pri-2 (Caenorhabditis elegans, 193.7); EMB2813 (Arabidopsis thaliana, 282.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:339492-341078:+ | gene-YKL045W_AKU4011 | rna-NM_001179611.1_AKU4011 | cds-NP_012879.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:302929-304515:- | gene-YKL045W_BG1 | rna-NM_001179611.1_BG1 | cds-NP_012879.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:358519-360105:+ | gene-YKL045W_Bruggeman | rna-NM_001179611.1_Bruggeman | cds-NP_012879.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:354953-356539:+ | gene-YKL045W_CAT1 | rna-NM_001179611.1_CAT1 | cds-NP_012879.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:352223-353809:+ | gene-YKL045W_CBS1585 | rna-NM_001179611.1_CBS1585 | cds-NP_012879.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:350353-351939:+ | gene-YKL045W_CBS436 | rna-NM_001179611.1_CBS436 | cds-NP_012879.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:336356-337942:+ | gene-YKL045W_CBS6412 | rna-NM_001179611.1_CBS6412 | cds-NP_012879.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:352184-353770:+ | gene-YKL045W_CBS6413 | rna-NM_001179611.1_CBS6413 | cds-NP_012879.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:353152-354738:+ | gene-YKL045W_CENPK1137D | rna-NM_001179611.1_CENPK1137D | cds-NP_012879.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:350179-351765:+ | gene-YKL045W_EthanolRed | rna-NM_001179611.1_EthanolRed | cds-NP_012879.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:350992-352578:+ | gene-YKL045W_FaliES1 | rna-NM_001179611.1_FaliES1 | cds-NP_012879.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000080.1:55916-57502:+ | gene-YKL045W_JAY291 | rna-NM_001179611.1_JAY291 | cds-NP_012879.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:359420-361006:+ | gene-YKL045W_MUCL30387 | rna-NM_001179611.1_MUCL30387 | cds-NP_012879.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:354310-355896:+ | gene-YKL045W_MUCL30388 | rna-NM_001179611.1_MUCL30388 | cds-NP_012879.1_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:351519-353105:+ | gene-YKL045W_MUCL39482 | rna-NM_001179611.1_MUCL39482 | cds-NP_012879.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:356375-357961:+ | gene-YKL045W_MUCL42920 | rna-NM_001179611.1_MUCL42920 | cds-NP_012879.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:353482-355068:+ | gene-YKL045W_NCIM3186 | rna-NM_001179611.1_NCIM3186 | cds-NP_012879.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:351714-353300:+ | gene-YKL045W_NCYC1407 | rna-NM_001179611.1_NCYC1407 | cds-NP_012879.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:376259-377845:+ | gene-YKL045W_PE2H3 | rna-NM_001179611.1_PE2H3 | cds-NP_012879.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:360998-362584:+ | gene-YKL045W_PE2H4 | rna-NM_001179611.1_PE2H4 | cds-NP_012879.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:353493-355079:+ | gene-YKL045W_S288C | rna-NM_001179611.1_S288C | cds-NP_012879.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000027.1:31602-33188:+ | gene-YKL045W_SA1 | rna-NM_001179611.1_SA1 | cds-NP_012879.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:352182-353768:+ | gene-YKL045W_ThermosaccDry | rna-NM_001179611.1_ThermosaccDry | cds-NP_012879.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:351327-352913:+ | gene-YKL045W_VR1 | rna-NM_001179611.1_VR1 | cds-NP_012879.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:350196-351782:+ | gene-YKL045W_ZTW1 | rna-NM_001179611.1_ZTW1 | cds-NP_012879.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:369455-371041:+ | gene-YKL045W_Sparadoxus | rna-NM_001179611.1_Sparadoxus | cds-NP_012879.1_Sparadoxus | 92.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |