Gene name: PRE8
Reference locus (S288C): YML092C
Gene biotype: protein_coding
Description: Proteasome core particle subunit alpha 2; Alpha 2 subunit of the 20S proteasome; Belongs to the peptidase T1A family
Top 10 interactors (score): SCL1 (0.999); RPN8 (0.999); PUP1 (0.999); UBP6 (0.999); PRE3 (0.999); RPN7 (0.999); PRE2 (0.999); RPN12 (0.999); RPN1 (0.999); PRE5 (0.999); RPT2 (0.999); RPN5 (0.999); RPT5 (0.999); RPN9 (0.999); RPN3 (0.999); PRE6 (0.999); RPT4 (0.999); RPT6 (0.999); PRE10 (0.999); RPN13 (0.999)
Homologues (species, bitscore): PSMA2 (Homo sapiens, 260.4); Psma2 (Mus musculus, 260.4); psma2 (Danio rerio, 263.5); psma2 (Xenopus tropicalis, 226.5); Prosalpha2 (Drosophila melanogaster, 252.3); pas-2 (Caenorhabditis elegans, 243.8); AT1G79210 (Arabidopsis thaliana, 268.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:79709-80461:- | gene-YML092C_AKU4011 | rna-NM_001182451.1_AKU4011 | cds-NP_013618.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:395669-396421:+ | gene-YML092C_BG1 | rna-NM_001182451.1_BG1 | cds-NP_013618.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:85962-86714:- | gene-YML092C_Bruggeman | rna-NM_001182451.1_Bruggeman | cds-NP_013618.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:87520-88272:- | gene-YML092C_CAT1 | rna-NM_001182451.1_CAT1 | cds-NP_013618.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:79710-80462:- | gene-YML092C_CBS1585 | rna-NM_001182451.1_CBS1585 | cds-NP_013618.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:85701-86453:- | gene-YML092C_CBS436 | rna-NM_001182451.1_CBS436 | cds-NP_013618.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:80474-81226:- | gene-YML092C_CBS6412 | rna-NM_001182451.1_CBS6412 | cds-NP_013618.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:78938-79690:- | gene-YML092C_CBS6413 | rna-NM_001182451.1_CBS6413 | cds-NP_013618.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:80576-81328:- | gene-YML092C_CENPK1137D | rna-NM_001182451.1_CENPK1137D | cds-NP_013618.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:80214-80966:- | gene-YML092C_EthanolRed | rna-NM_001182451.1_EthanolRed | cds-NP_013618.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:80491-81243:- | gene-YML092C_FaliES1 | rna-NM_001182451.1_FaliES1 | cds-NP_013618.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000345.1:8939-9691:+ | gene-YML092C_JAY291 | rna-NM_001182451.1_JAY291 | cds-NP_013618.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:84407-85159:- | gene-YML092C_MUCL30387 | rna-NM_001182451.1_MUCL30387 | cds-NP_013618.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:87632-88384:- | gene-YML092C_MUCL30388 | rna-NM_001182451.1_MUCL30388 | cds-NP_013618.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:79724-80476:- | gene-YML092C_MUCL39482 | rna-NM_001182451.1_MUCL39482 | cds-NP_013618.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:84521-85273:- | gene-YML092C_MUCL42920 | rna-NM_001182451.1_MUCL42920 | cds-NP_013618.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:85941-86693:- | gene-YML092C_NCIM3186 | rna-NM_001182451.1_NCIM3186 | cds-NP_013618.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:80518-81270:- | gene-YML092C_NCYC1407 | rna-NM_001182451.1_NCYC1407 | cds-NP_013618.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:85951-86703:- | gene-YML092C_PE2H3 | rna-NM_001182451.1_PE2H3 | cds-NP_013618.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:85889-86641:- | gene-YML092C_PE2H4 | rna-NM_001182451.1_PE2H4 | cds-NP_013618.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:85987-86739:- | gene-YML092C_S288C | rna-NM_001182451.1_S288C | cds-NP_013618.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000054.1:77954-78706:- | gene-YML092C_SA1 | rna-NM_001182451.1_SA1 | cds-NP_013618.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:79787-80539:- | gene-YML092C_ThermosaccDry | rna-NM_001182451.1_ThermosaccDry | cds-NP_013618.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:84169-84921:- | gene-YML092C_VR1 | rna-NM_001182451.1_VR1 | cds-NP_013618.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:59287-60039:- | gene-YML092C_ZTW1 | rna-NM_001182451.1_ZTW1 | cds-NP_013618.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:90584-91336:- | gene-YML092C_Sparadoxus | rna-NM_001182451.1_Sparadoxus | cds-NP_013618.1_Sparadoxus | 93.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |